KEGG   Gekko japonicus (Schlegel's Japanese gecko): 107114600
Entry
107114600         CDS       T04299                                 
Symbol
POLR1B
Name
(RefSeq) RNA polymerase I subunit B
  KO
K03002  DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6]
Organism
gja  Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:gja00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    107114600 (POLR1B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gja03021]
    107114600 (POLR1B)
Enzymes [BR:gja01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     107114600 (POLR1B)
Transcription machinery [BR:gja03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Core subunits
     107114600 (POLR1B)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_3 RNA_pol_Rpa2_4 RNA_pol_Rpb2_7 RNA_pol_Rpb2_2
Other DBs
NCBI-GeneID: 107114600
NCBI-ProteinID: XP_015271623
Position
Un
AA seq 1134 aa
MEAACKWRDLPDSPSLKHLTEPSYGLVKEQQLSALQEVTRAHIESFNHAVGEGLYRAVQA
IPPLEFAFKHDRITLAIIGAVISPPMVPKGSICKELKVYPAECRGRRSTYRGKLMADISW
SLNGSPKGIIKQSLGNIPIMVKSKLCNLYGLSPKELIEHHEEEEEMGGYFIINGIEKIIR
MVIMPRRNFPLALIRPKWKSRGPGYTQYGVSMHCVRDEHTAVNMTLHYLESGTVMVNFIR
QKELFFIPLGFVLKALVNFSDFQIFQELMKGKEEDTFYRNCVCQMLRLVVEEGCITQRQV
LNFLGQRFRVKLDLPEWHTSEQVGEFLFDQCICIHLKTNAEKFYLLCLMTRKLFTLAKEG
CMEENPDSLMNQEVLTAGQLYLMFLKEKMEAWLQSVKIALEKKAQKSNVTINSESMMKIV
GLGTDFTRMFEFLLATGNLRSKTGLGMLQSSGLCVMADKLNFVRYLSHFRCVHRGSDFLK
MRTTSVRKLLPESWGFLCPVHTPDGEPCGLMNHMTATCEIVTQPSYTISLPPLLCSFGVT
PVDGTPSQSYSECYPVMLDGSLVGWIEKDLAPGLVDTLRYFKMMQEKRIPVWTEVVLIPI
TGKPSLYPGLFIFTTPCRMMRPVQNLALGKEELIGTLEQVFLNIAVSEDEIVPGVFTHQE
LLPHSMLSVVASFIPFSDHNQSPRNMYQCQMSKQTMGFPLLTFQNRSDDKLYRLQTPQSP
LVRPSMYDYYNVDSYPIGTNAIVAVISYSGYDMEDAMVVNKASWERGFAHGSIYKSEYID
LAEKVKEGSENLVFGIGRDSPNPLKNLDADGLPYIGTKLEYRDPYYSYLNLSTGESFVIY
HKNRETCYVDNIKICSNDTGTGRFKSVCITLRIPRNPTIGDKFASRHGQKGILSRLWPTE
DMPFTESGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFTFSEENSALA
HFGEMLKAAGYNYYGTEKMYSGVSGVELETDIFIGVVYYQRLRHMVSDKFQVRTTGARDK
VTNQPIGGRNVQGGIRFGEMERDALLAHGTSFLLHDRLFHCSDRSVAHVCVKCGSLLSPL
LKPPPLGSTTRIRQYICTICERSDTIETIAVPYVFRCFVAELAAINVKVKLDVK
NT seq 3405 nt   +upstreamnt  +downstreamnt
atggaagccgcgtgcaagtggcgggatttgccggattcccccagccttaagcacttgacg
gagccgagctatgggctggttaaggaacagcagctctcggcgctgcaggaagtgacacga
gcgcacatcgagtccttcaaccatgccgtgggcgaagggctgtaccgggcagtacaggct
attccacctctagagtttgcatttaagcatgatcggatcactttggcaattattggggct
gtgatcagtccacctatggtaccaaagggcagtatatgtaaagaactgaaagtttaccca
gcagaatgcagggggcgcagaagcacctaccgtgggaaactgatggctgatattagctgg
tcattgaatggctcccctaaagggattattaagcagtcccttggaaatattccaattatg
gtgaagtccaagctatgcaatctctatggcctttctcccaaagaactaatcgaacaccac
gaggaagaagaggaaatgggaggctatttcataattaatggtatagaaaagataattcga
atggtaatcatgccaaggcgcaacttcccccttgcactgataagaccaaagtggaaatcc
agaggccctggctacacacaatatggtgtctcaatgcactgcgttagagatgagcacact
gctgttaacatgacccttcattatcttgaaagtggcacagtgatggtgaacttcattcgt
cagaaagaattgttctttatcccactgggattcgtgctgaaggcattagttaatttctca
gatttccagattttccaagagttgatgaaaggaaaagaagaagatactttctacagaaac
tgtgtgtgtcagatgctgaggctagtggttgaagaaggctgcatcacgcagagacaggtt
ctgaacttcctgggtcagcgcttcagagtgaaactggaccttcccgagtggcacaccagt
gaacaagttggagaattcctgtttgaccagtgcatctgcatacacctgaaaaccaacgct
gaaaagttctacttgctgtgtctcatgacccggaaactgtttactttagctaaagaaggc
tgcatggaagagaatcctgacagtttaatgaatcaagaagtgctcactgcaggacaactt
tacctcatgtttttaaaggagaagatggaagcttggttacagtccgttaaaatagcctta
gaaaagaaagctcagaagtcaaacgtaacaattaattcagaaagcatgatgaagattgtt
ggcctaggaacagattttacaaggatgtttgaattcctccttgccactggtaatctgcga
tctaaaaccggtctggggatgttgcaaagctctggcctgtgtgtgatggcagacaagctg
aacttcgttcgctacctctctcatttccgctgcgtgcacagaggttctgattttctcaag
atgcgaaccacctcagtgcgcaagttgctgccggagtcgtggggttttctatgtcctgtg
cacaccccagatggggaaccctgtggcttgatgaatcacatgacagctacatgtgaaata
gtaacacagccttcatacacaatatccctgccacctttgctttgctcattcggtgtcact
ccagttgatggtacgccaagccagtcctattcagagtgttaccccgttatgttagatggc
tctttggtgggctggatagagaaggatctagctcctggtcttgtagacacactaagatat
tttaagatgatgcaagaaaagagaattccagtctggacagaggtggtccttatcccaata
acagggaaacccagcctgtacccagggctcttcattttcactacaccgtgtaggatgatg
cgtcctgtacaaaacttggccttggggaaagaagaattgattggcaccctagagcaggtc
ttcttaaacattgctgtgtctgaggatgaaattgtacctggcgtgttcactcatcaggag
ctccttccccatagcatgttaagcgtagtagcaagtttcattcccttctcggaccataac
cagagtcccagaaacatgtaccagtgtcagatgagcaagcaaactatgggctttccacta
ctgacttttcagaaccggtcagatgacaaactctaccggcttcagacccctcagagcccc
ttggtgcggccatccatgtatgattattacaacgtggactcttacccaattggtacaaat
gcaatcgttgctgttatctcctacagtggctatgacatggaagatgcaatggttgtaaac
aaagcttcatgggagagagggtttgctcatggaagtatctacaagtcagagtatattgat
cttgctgaaaaagtaaaggaaggatctgaaaatctggtttttgggattggtcgcgatagc
ccaaatcctttgaagaatttggatgctgatggtctgccctacatcgggaccaagcttgaa
tacagggacccttattacagctatctgaatctcagcacaggggaaagctttgtgatctac
cataagaacagggaaacctgttatgtggataacatcaaaatatgtagcaatgacacagga
actggaagattcaaaagtgtttgcatcactctgagaatcccgcggaatccaactattggg
gacaaatttgccagccggcacgggcagaaaggcatcttgagccggctgtggccaactgag
gacatgccatttacagaaagcggaatggtgccagacattctcttcaaccctcatggcttt
ccatcccgaatgaccattggcatgttaattgagagcatggcagggaaatcggcagcgctg
cacgggctctgccacgatgccaccccattcacattttctgaggagaactctgccctggct
cactttggtgagatgctgaaggctgctggctacaattactatgggactgagaagatgtac
agtggcgtcagtggagtagagctggaaacggacattttcattggagttgtgtactaccag
cgcttgagacacatggtctctgacaagtttcaggttaggactacaggggccagagacaaa
gtcaccaaccagcccattggaggaaggaacgttcaaggaggcattcgctttggagagatg
gagcgggacgcattgttggctcatggaacatccttcttgctgcacgaccgcctcttccac
tgctccgatcgctcagtggctcatgtgtgcgttaaatgtggcagtttgctttcccctctg
ttgaaacctccacctcttgggtccaccacccgcattaggcagtacatttgtaccatttgt
gagcggagcgataccatagaaacaattgctgtgccttatgtcttccggtgttttgtggca
gaacttgcagccattaatgtaaaagtgaaacttgatgtgaaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (36)   
   KEGG ORTHOLOGY (1)   
   RefGene (32)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (50)   

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