KEGG   Gekko japonicus (Schlegel's Japanese gecko): 107114667
Entry
107114667         CDS       T04299                                 
Name
(RefSeq) probable ATP-dependent RNA helicase DDX60
  KO
K20103  ATP-dependent RNA helicase DDX60 [EC:5.6.2.7]
Organism
gja  Gekko japonicus (Schlegel's Japanese gecko)
Brite
KEGG Orthology (KO) [BR:gja00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gja03019]
    107114667
Enzymes [BR:gja01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     107114667
Messenger RNA biogenesis [BR:gja03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     107114667
SSDB
Motif
Pfam: DEAD ResIII Helicase_C
Other DBs
NCBI-GeneID: 107114667
NCBI-ProteinID: XP_015271720
Position
Un
AA seq 1935 aa
MGVFELRAEKMEEEETNVEMNEDTNDLTWEQFQNFLIEEAKQAFKAACENVLRNACKNMM
RSLQNIPLEGKDEILQEMKKIPTKDKGLKKALRTFKAFKQLRKKVIDGVRDFLEEEVQEY
KDLRHLEEEGEIEIKKSWKSAMASAESDSGEEFSEKESDSDDFDSDSSEVSDCFLEDMSS
LLDQLKEPNDIKSCDNFYELVDTEDGSSAACKENSKMPEDNCSYQDPELRKSRKFLDRLS
VHVFASLSKAKYSSILNDFVESEFFVIDGDSLLIRCLCTPRPFLSFIYTVECFLNDFIQK
GARFIIVFFKDVEQMYFGQPYLLFLRTMLIQHLERNTDIILHTDFSNCLSPEWHIFIKEN
YPYFMVISDMGLTSIQTDYLNIFLSLSLSKKINVVLVSGENSDILRIHAYHVQSMYRHRG
FFLTYEKDILHAWETMLKHLTKLQDMELFLYKHLKFNVRMMHKEVCQAISLLKDLWPEGS
DLRRAFCVLTCAVGMKIYKSMLEKAKTTDEIKGEQMEQRNEKDIIKELTMEEAADLCRIQ
CLSVAFLCNLPLSQRAQIRTIKSRWTVQAFPFIEMLQRCDYLVLKHLNTVNDWKLDFTYL
PDLRDIFLWKNLVHYYESEYCAGLKLEMGKEIKNDYEHLWNTATTIVGLCDLGDAFPVRN
TSNLFLQQSEVTVKDVPRFGLIPVKSDIVEDYAGAILKDLSFLSSDESAVMLLPKHKEFD
ELYHWHSGRPLSDDYDRTQNSFNTKTNDPYQRKQAQKLQSYYQLYGRSLEGNKSQTIINL
EDVCTNAAVKKPKKSQRSSKAEKIVEDNRKRRKAQQEKKEDDQWHTLEKSIEKDIKTNFT
SGMKRFEKFLNTCQSNSVKFIAEMAGLNFCLEVWKEHCKSQGKGAKDFNIAVQVMKRIHM
ILDKHQEFLEKSHLKALARSLQCLGFEKLATSLNSQVNTDSAVHXKYLAKYSLGIGAARF
QLQYMGHYLFRDERTDPDLRVRHFIPDTWQRELLDVVDNNESAVIVAPTSSGKTYASYYC
MEKILRESNDGVVVYVSPTKALVNQVAATVQNRFSKKMPDGFVVCGVFTRDYRHDALNCQ
ILVTVPQCLEILMLSPHRQAWVKRIKYIIFDEVHCLGGEIGADVWEHLLVMIRSPFLALS
ATISNPKHLTEWLQSVKNYWQETESAMDESTTSASFTRCTRKLQKQLAEKKSYRVRLVLY
GERYNDLEKHVCSLKDNDVVLDHYHPCAALTVKHIEKYGIPLDIAFSPRESIQLFDAMLN
NWPEWPRAHELEPEEYICFKNKITIKKADARKYEQDLKDELSGWIALGQKDKLNHVLESL
KPSPTDSSEHEKYMRFPLLVDKLNAMDKLPAIFFMFNIHTVEQAAWNVFCNLQKKNKQSS
EQNPKIKKEIESLRNKRSKMKKKIQIIMSLDPKKQTISKVENVIATLTEYTALKKRLSKL
TKVPPDCSYANQRAMDEKTLGRLLFRLRRESRSSNQAMLAKRGIGYHHSSMSSKQRQFVE
MLFRMGYIQVVTATSTLALGINMPCKSVVFVEDSVYLDALNYRQMSGRAGRRGQDVIGNV
YFYGIPLPKVQKLMKSNVPELKGQFPLSITLVLRLMLLAAKADDKADAKAKVLSVLNHSL
LSFSQQRNKDMLKIYFIFSFQFLLKEGYLDQEGKPIGYAGLVSHLHYHEPSNFALVDFLT
KGLLHKLCQPIMKGSPIFSEDVMEKLVLVLAHLFGRRHLPACYIKYKKTFSQSKVFLEDL
PEEFAAAVKAYNSKVENNFGCFLLTAAKLADMEQEYHLPLSKLDFAGRTYEDSDLASHLI
KSTKRITAISPFACLSGMVDQDLFRIHNVNKAVLRTVGVDASNAPVLWIEKYDNIGRKMP
LNAYALDFYKHGSLNTLLEDNGLNRGDAYNMLRDFLLTIKAIEASLCELCEDENDNLVLA
FKQLEKNYKAKLDKV
NT seq 5808 nt   +upstreamnt  +downstreamnt
atgggagtatttgaactaagagctgagaaaatggaggaagaggagactaatgtggaaatg
aatgaagatactaatgaccttacgtgggaacagtttcaaaactttttgattgaagaggcg
aaacaagcatttaaggcagcctgtgaaaatgtactgagaaacgcctgcaagaatatgatg
agaagtttacagaatatacctctagaagggaaagatgaaatattgcaggaaatgaaaaag
ataccaacaaaagacaaaggtttaaagaaagctttaaggacttttaaagcatttaaacaa
ctaaggaaaaaggtgatcgatggtgtaagagattttttggaagaggaagtgcaagagtac
aaggacttacggcatcttgaagaggaaggggaaatcgagataaaaaagagctggaagtct
gcaatggcttctgcagaatctgattctggtgaagagtttagtgagaaggagagtgacagt
gatgattttgattctgactcgagtgaggtgagtgactgttttctagaagatatgtcctca
ctcctggaccagctcaaggaacctaatgatattaaaagctgtgataacttttatgaactt
gtggatacagaagatggaagttctgcagcttgtaaggaaaattcaaaaatgcctgaagac
aactgcagctaccaggacccagaactaagaaaaagtcgaaaatttctggatcgtttatca
gtgcatgtttttgcatctttatcaaaagctaagtattccagcatactgaacgactttgta
gaatctgagttttttgtaattgatggagattcactacttatcagatgtttatgtacccca
agaccattcctgtcctttatttacactgtagaatgttttctgaatgattttattcaaaaa
ggagcaagatttataattgtattcttcaaggatgtggagcagatgtattttggtcaacct
tatttactgttcttacgtactatgctaattcaacacttggaacgcaacactgacattatt
cttcatacggatttttctaattgtttgtcgccagaatggcacattttcatcaaggaaaac
tatccatattttatggtcatttctgatatgggactgacatccatacagacagactatctg
aacatattcctcagcctttcattgtcaaagaaaatcaatgtggtacttgtatcaggagag
aattcagacattcttagaattcatgcttatcacgttcaaagcatgtatagacacagagga
tttttcttaacgtatgaaaaggatattctgcatgcttgggaaactatgctcaaacattta
acaaaactccaggacatggaactattcctgtacaaacatctgaagttcaacgtaagaatg
atgcataaggaggtctgtcaggctatatcattgcttaaggatttgtggccagaaggatcg
gaccttagacgtgctttctgcgttcttacgtgcgcagtgggaatgaaaatttacaagagc
atgttagagaaagcaaagacaactgatgaaataaaaggagaacaaatggaacagaggaat
gaaaaggacataataaaagagttaacaatggaagaagcagcagatctttgtagaattcag
tgcctcagtgtggcttttctttgtaacttgccactttcacagcgagctcaaattagaacc
atcaagtcccgctggactgtacaggccttcccatttatagagatgctacaacgatgtgac
taccttgttctgaaacatctgaatactgtgaatgactggaaattggatttcacgtatctg
ccagacttgcgagacatctttctgtggaagaatcttgtgcattactatgaatcagaatac
tgtgcaggcttaaagttagaaatgggaaaagaaattaagaatgattatgaacatctgtgg
aatactgcaaccacaatagttggcctgtgtgatcttggggatgcttttccagtgcgaaac
acctcaaacctcttccttcaacagagtgaagtcacagttaaagatgttcccaggtttggc
ctaattccagttaaatccgacatagtggaagactacgctggagccattttgaaagatcta
agctttttaagcagcgacgagtctgcagtaatgttgcttcctaaacacaaagaatttgat
gaactttatcactggcattcaggcagacctcttagtgatgactatgacagaacacaaaac
agttttaataccaaaactaatgatccatatcaaagaaaacaagcacaaaagcttcagtct
tattatcagctttatggaagatcattggaaggtaacaaatcacaaacaattataaacctg
gaggatgtgtgtaccaatgctgctgtcaaaaagccaaagaaatcacaaagaagtagtaaa
gcagagaaaattgtagaggacaacaggaagagacgaaaagctcaacaagaaaagaaagaa
gatgatcaatggcataccttagaaaaatcaattgaaaaagacattaaaacaaactttacg
tctggaatgaagagatttgagaagtttctgaatacatgtcagagtaattcagtgaaattt
attgcagaaatggcaggacttaatttctgcttagaagtgtggaaggaacattgcaaaagt
caaggtaaaggagctaaagatttcaacatagctgtccaagtgatgaaaaggattcatatg
attttggacaaacaccaagaattcttagagaagtcacatttaaaggcattagccagaagt
ctacaatgccttgggtttgaaaagctggctacttctttaaacagccaggtaaacactgat
tctgcagtgcattgaaaatatcttgccaagtattcattaggaattggagcagctcgattt
cagctgcagtatatgggtcactacttgttcagagatgagaggacggatccagatctcaga
gtacgacattttataccggacacatggcagcgagagcttttggatgtggtagacaataat
gagtctgcagtcattgttgcgcctacttcatcaggaaaaacctacgcatcctactattgc
atggagaaaatcttaagagagagcaatgatggagtagttgtgtatgtgtctcccacaaag
gctcttgtaaaccaagtggcagcaacagtacagaatcgcttttctaaaaaaatgcctgat
ggattcgtggtgtgtggcgtatttacaagggattatcgccatgatgccttgaattgccag
atactagtgacagtacctcagtgtttggaaatcttgatgctctcccctcatcgccaagca
tgggtaaaaaggatcaaatacattatatttgatgaggtccattgccttggtggagaaatt
ggagcagacgtttgggaacaccttctggttatgattcgaagtccatttttagctctttct
gccaccattagtaatcctaaacatcttactgaatggttacagtcagtcaaaaattattgg
caagagactgagagtgcaatggatgaaagtactacttctgcaagtttcacaaggtgcact
aggaagctgcaaaaacaactggcagagaagaaatcatatcgagttagattagtgctgtat
ggagagagatacaatgatttagaaaagcatgtttgctccctgaaggataatgatgtcgtg
ttagatcactatcacccatgtgctgcattaacagtcaaacacattgagaaatatggaatt
cctttggacattgctttttctccacgagagagcatccagctgtttgatgcaatgctaaat
aattggccagaatggcccagagcacatgaattggagcctgaggaatatatttgcttcaag
aacaaaataacaattaaaaaggcagatgcaaggaaatatgaacaagatctaaaggatgag
ctatctggctggattgctcttgggcaaaaggataagctgaaccatgttctggaatccctt
aaaccgtctcctactgattcttcggaacatgagaagtacatgagatttccactcttggta
gacaaactgaatgcaatggacaaattgcctgccatatttttcatgtttaacattcataca
gtagaacaagctgcttggaatgtattctgcaacttgcaaaaaaagaataaacaaagcagt
gagcagaatccgaaaattaaaaaagaaattgaaagtttaagaaataagcgaagtaagatg
aagaaaaagatacagataattatgtctcttgacccaaaaaagcagacaatatctaaagtg
gaaaatgttattgctactcttactgaatatactgccttgaagaaaaggctttcaaaatta
accaaagtccctccagactgcagctatgcaaaccaaagagctatggatgaaaagactttg
ggaaggttactttttcgattacggagagagagcagaagttcaaatcaagcaatgttggca
aagaggggcattggataccatcattcttctatgtcatccaaacaacggcaatttgtggaa
atgttattcagaatgggatatattcaggttgttacagcaacttcaacactggcattaggc
attaatatgccatgtaaatctgttgtttttgtggaagattctgtctatctagatgctttg
aactacaggcagatgtctggacgtgctggaagacgtggacaagatgtgataggaaatgtg
tatttttacggcatccctctgcccaaggttcaaaaattgatgaaatccaatgtacctgaa
cttaaaggccagttccctttgagcatcaccctggtactgagactcatgctgctggctgca
aaggctgatgataaagcagatgccaaagcaaaggtattgtcagtgttgaaccattcactg
ttatcattcagtcagcaaaggaacaaggacatgttgaaaatatactttatcttttccttc
caatttcttctcaaggagggctatttggaccaagaaggtaagcctatagggtatgctgga
cttgtcagtcatcttcactatcatgaaccttcaaattttgccctggttgactttctcacc
aaaggtttactgcacaagttatgccagccaattatgaaagggtcacctatattttctgaa
gatgtaatggaaaaattagtgctggtgcttgcacacctctttggaaggagacatctacca
gcctgctacataaaatataagaaaacattttcccagtcaaaggtgtttctggaggatctt
cctgaagaatttgctgctgcagtaaaagcatataacagtaaagtagaaaataactttgga
tgttttcttctcactgctgccaaactggctgacatggaacaagaataccaccttccattg
tcaaaactagattttgcaggtagaacctatgaagattctgatctggcatctcatttaatt
aagagcactaaaagaataactgcaatctcaccttttgcatgcctgtctggaatggtggac
caagatttgttcagaattcacaatgtcaacaaggctgtattaaggactgttggtgttgat
gctagtaatgctcctgtgctttggattgagaaatatgataatattggaagaaaaatgcca
ctcaatgcttatgcccttgatttctataagcatggctccttgaatacactgctcgaagac
aacggattaaatagaggagacgcctacaacatgcttcgggattttttactcaccatcaaa
gcaatagaggcttctctgtgtgaactgtgtgaagatgagaatgacaatcttgtgctggct
tttaaacaactggaaaaaaactacaaagcaaaactggataaagtataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (90)   
   KEGG ORTHOLOGY (1)   
   RefGene (86)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (99)   

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