KEGG   Gekko japonicus (Schlegel's Japanese gecko): 107125368
Entry
107125368         CDS       T04299                                 
Symbol
BLM
Name
(RefSeq) Bloom syndrome RecQ like helicase
  KO
K10901  bloom syndrome protein [EC:5.6.2.4]
Organism
gja  Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03440  Homologous recombination
gja03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:gja00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    107125368 (BLM)
   03460 Fanconi anemia pathway
    107125368 (BLM)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gja03032]
    107125368 (BLM)
   03400 DNA repair and recombination proteins [BR:gja03400]
    107125368 (BLM)
Enzymes [BR:gja01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     107125368 (BLM)
DNA replication proteins [BR:gja03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    107125368 (BLM)
DNA repair and recombination proteins [BR:gja03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecQ family DNA helicases
     107125368 (BLM)
    Bloom's syndrome complex (BTR)
     107125368 (BLM)
   FA (Fanconi anemia) pathway
     107125368 (BLM)
SSDB
Motif
Pfam: DEAD BDHCT Helicase_C RecQ_Zn_bind HRDC RQC ResIII
Other DBs
NCBI-GeneID: 107125368
NCBI-ProteinID: XP_015284291
Position
Un
AA seq 1079 aa
MPPSSSVFKSIRDSSFERAAGDVKSRSPDSGFASCCFNEGQEDKSSPRETLLYRVMKGIC
DLVDSISERELRSLSCGKELLQKRDHRRKLLSYTEASGKDGNTSPAVNRQASLGDENSLY
SEAALQLKSTFATGPRRSSVFGGGLFSESLPAAAQPHKYHSTPFAARTQNPDEAEVFTLS
ESSTLGSDISGNAGISLSTPGIREGSSLRGDRNERGLRAKLNLAALRDRSEPSGAKSQPG
GKRRLATPDPDFDIDIDIDELDDMLNSSGVEQPSRGLCQPVREDHPAKGNGRLSDPASPR
PNYPMSVKSCAAPRGHDPPRNAVLERFKGLAFPHSNEMMKIFHKRFGLHHFRVNQLEAIN
AALLNEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVDQVQKLTSMDIPATYL
TGDKTDAEASRIYMQLSKKDPIIKLLYVTPEKVCLSGRLMSILENLFERHLLARFVIDEA
HCVSQWGHDFRPDYKRLNMLRKKFSSVPMMGLTATANPRVQKDILNQLEMHRPQVFSMSF
NRHNLKYDVLPKKPKSVALDCLQWISKYHPHDSGIIYCLSRYECDSVASVLQRAGVLALA
YHAGLPDNTRDLVQKKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSIEGYYQES
GRAGRDGEMSHCVLFYSYSDVSRLRRLILMEKDRNRHSQQTHFNNLYSMVHYCENVVECR
RLQLLAYFGETDFNSKYCKEHPEVSCDNCCKKQDYKLKNVTEEVKNIIRFVRDHCGETGA
RSMKRNARYTLNMMIEIFLGTKSAKIQSGIFGKGAAYSRHNAERLFRKLVLDKILDEELF
ITANDQAVAYVQTGERAQVVLNGSLQVEFCETDSASSIRRQRVSAANISKREEMVKKCLS
ELTNVCKNLGKLFDVHYFNIFSTATLKRIAETLSSDPAVLLQIDGVTEDKLEKYGAEIIE
VMQKYIEWTLPGPEEPAPGMEVESHYSTDEGAACTTSGYFRNGASKGRKRKKPQFFREAK
KKKTSSRGQQAHPKRNYKTYTSASSKVPVTTGGLSKRPGIMAPPKPQSRQYLKPSYSFV
NT seq 3240 nt   +upstreamnt  +downstreamnt
atgcctccttcctcatctgtttttaaaagcattcgagattcttcctttgagagggcagct
ggagacgtgaaaagccgctcgccagactctggttttgccagctgttgcttcaatgaaggg
caggaagataagtcctcgccacgtgagacccttctgtacagagtgatgaagggaatctgt
gacctggtggattccatctcggaaagggagctgaggtctttgtcttgtgggaaggagctg
cttcagaagagagaccacagaagaaagctattaagttatactgaagcaagtggaaaggac
ggcaacacctctcctgccgtaaaccgccaagcatctcttggggacgagaactctctgtac
agcgaagccgctcttcagctgaagagcacttttgcgaccggcccccggagaagctctgtc
tttggcggtggacttttctccgaatcactgcctgctgctgcgcaaccacacaaatatcat
tcgaccccctttgctgcccggacgcagaacccagatgaggctgaggtattcacattgtca
gagagttccacccttggcagtgatatctcagggaatgcaggaatttctttatccacgccg
ggcatccgtgaaggatcgtcgctcaggggtgacagaaacgagcgcggtctgcgtgccaag
ttgaacctggcagctttaagggaccgaagcgagcccagcggggctaagagccaaccggga
ggcaagaggcgcttggcaacaccagacccggattttgatatcgacattgatatcgatgag
ctggacgatatgctcaatagctcaggagtggagcagccgtcgagggggctctgccaaccc
gttcgggaggaccatcctgccaaagggaatgggcgtctttcagatcccgcttccccccga
ccaaactaccccatgtctgtcaagagctgtgcagccccacggggccacgatccgcctaga
aatgcagtgctggagcgcttcaaaggcttggcattcccgcattccaacgaaatgatgaag
atatttcacaaaaggtttggcctccaccacttccgagtgaatcagctggaggccatcaat
gccgctctgttgaatgaagactgtttcatcttgatgcctacaggagggggcaagagctta
tgctaccagctgccggcctgcgtctccccgggagtcaccatcgtgatctcccccttgagg
tctctgatagtggaccaagttcagaagctgacgtcaatggatattccggctacttatctg
acgggtgataagacagatgccgaggcatccagaatttacatgcagctctcaaagaaagat
cccatcataaaacttctctacgtcaccccagagaaggtctgcctgagtggccgcctgatg
tccatcctggagaatctgttcgagcggcacctcttggcccgctttgtgattgacgaggcg
cactgtgtcagccagtggggccatgactttcgcccagactacaagcggctgaatatgctt
cgcaagaagttctcctccgttcccatgatggggctgacggccacggccaatccgagggtg
cagaaggacatcctcaatcaactggagatgcatcggccacaagtgtttagcatgagcttc
aacaggcacaacttgaaatatgatgttctgcccaagaagccaaaaagcgttgctttggac
tgtttgcagtggatcagtaaatatcacccacatgattctggaataatctactgcctctcg
cggtacgaatgtgactcggttgccagcgttttgcagagggcaggcgtgctggcgcttgcg
tatcacgccggtctccccgacaacaccagggatctcgtgcagaagaagtggattaatcag
gatggatgccaggtgatctgtgccaccattgctttcggcatggggatcgacaagccggac
gtgcgcttcgtgatccacgcttctctcccaaagtccattgagggctactaccaggagtcg
ggccgcgctgggcgggatggcgaaatgtcccactgcgtccttttctacagctacagtgac
gtctccagactgaggaggctcattctgatggaaaaagatcgcaacagacattctcagcag
actcatttcaacaacctctacagcatggtccactactgcgagaatgtcgtggagtgccgg
aggctgcagctgttggcctactttggggaaacggacttcaattcgaagtactgcaaggaa
catcccgaagtcagttgcgacaactgctgcaaaaaacaggattataaattgaagaacgtg
actgaagaagtcaagaacatcattaggtttgttcgagaccactgtggcgaaacgggagcg
agaagtatgaagagaaatgcaagatacacgttgaatatgatgattgagattttcttgggt
acaaaaagtgccaagattcaatcgggcatatttggaaaaggagcggcttactctcgccat
aatgctgagcggctgttcagaaagctggtcctagacaagattctggatgaagagctgttt
atcacggccaacgaccaagctgtcgcctatgtccagacgggggagagagcacaggtggtg
ctgaatggctctttgcaggtggagttctgtgaaacagacagcgccagcagcattcgcagg
cagcgggtttcagcggccaacatttccaagcgggaagagatggttaagaaatgcctctcg
gagctcaccaacgtttgcaaaaaccttgggaaactgtttgatgtccattacttcaacatt
ttcagcactgctacccttaaaagaatagcagagacgttgtcttcggacccagcagtcctg
ctgcagatcgatggtgtcacggaggacaaactcgaaaagtacggagcggaaataattgaa
gtgatgcagaaatacattgagtggacactgccaggaccggaagagccagccccgggcatg
gaggttgagagccattacagtactgacgagggagcggcgtgcacaacctccggctatttc
cgcaacggggccagcaagggaaggaagaggaaaaagccacaattcttcagagaagccaag
aagaagaaaacgagctccagaggccagcaggctcacccgaaaaggaattacaaaacgtac
acatcggccagctccaaagttcccgtcacgaccggagggctcagcaagaggcctgggatt
atggcgccgcccaaaccgcagagcaggcagtacctgaagccgtcttactcctttgtgtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (35)   

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