KEGG   Gekko japonicus (Schlegel's Japanese gecko): 107126141
Entry
107126141         CDS       T04299                                 
Symbol
DDX46
Name
(RefSeq) DEAD-box helicase 46
  KO
K12811  ATP-dependent RNA helicase DDX46/PRP5 [EC:5.6.2.7]
Organism
gja  Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gja00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107126141 (DDX46)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gja03041]
    107126141 (DDX46)
Enzymes [BR:gja01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     107126141 (DDX46)
Spliceosome [BR:gja03041]
 Complex A
  U2 snRNP components
   U2 related factors
    107126141 (DDX46)
 Complex B
    107126141 (DDX46)
SSDB
Motif
Pfam: DEAD Helicase_C CdAMP_rec
Other DBs
NCBI-GeneID: 107126141
NCBI-ProteinID: XP_015285141
Position
Un
AA seq 1050 aa
MGRESRSTKQQVSKQKQHYRKRSSSRGRSGSRSRSRSPSDKRAKRGDDRRSRSRDRDRRR
ERSRSRDKRRSRSRDRKRVRRSRSRERERSRERRRSRSRERRRSRSRSRGRRSRSSSPGK
NKKVENRSRSKEKVEGVEVIKEKKKEKEDKEEEKDKDVSNFDQNKLEEEMRKRKERVEKW
REEQRKKAMENIGELKKEIEEMKQGKKWSLEDDDDDDEETAEGEKEGNEIEDEELDPLDA
YMEEVKEEVKKFNMRSVKGGGGSEKKTGPTVTKVVTVVKTKKASPETEKKKGELMVNDQD
AMEYSSEEEEVDLQTALTGYQTKHRKLLEPVDHGKIEYEPYRKNFYVEVPELAKMTQEEV
NAYRLELEGITVKGKGCPKPIKTWVQCGISMKILNSLKKHGYEKPTPIQAQAIPAIMNGR
DLIGIAKTGSGKTIAFLLPMFRHIMDQRQLEEGEGPIAVIMTPTRELALQITKEGKKFSK
TLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLDE
ADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVC
SDVEQQVIVIEEDNKFLKLLELLGHYQEKGAVIIFVDKQEHADGLLKDLMRASYPCLSLH
GGIDQYDRDSIINDFKSGVCKLLVATSVAARGLDVKHLVLVINYSCPNHYEDYVHRAGRT
GRAGNKGYAYTFITEDQARYAGDIIKALELSGTPVPAELEKLWNDFKDQQKAEGKTIKKS
SGFSGKGFKFDETEEALANERKKLQKAALGLQDSDDEDTAVDIDEQIESMFNSKKRVKDM
ASSGGTSNVPAPTAGNAEKLEIAKRLALRINAQKNLGAEAQVLVSFQFKDVMQQATNAIL
RGGTIQAPTVSAKTIAEQLAEKINAKLNYVPLEKQEEEKQEGGQNESFKRYEEELEINDF
PQTARWKVTSKEALHRISEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKA
KAEITRLIKEELIRLQNSYQPTNKGRYKVL
NT seq 3153 nt   +upstreamnt  +downstreamnt
atgggtcgagagtccagatcaacaaagcaacaggtgtccaaacaaaaacaacattatcgg
aagcgctcctcatcacgagggcgctctggtagccgttctaggagtcgttctccatctgac
aaaagagcaaaacgtggagatgatagacgttctagaagtagggacagagatcgcagacgc
gagcgatcacgcagcagagacaagaggagatctcggtcacgtgacaggaagcgtgtgagg
cgttcaagaagtagagagagggaacggagcagagagaggagacgatcacggagtagagag
aggagacgatccagaagtcgaagcagagggagacgatcccgatcttctagccctggcaag
aacaagaaagtagaaaacagatcacgatctaaagaaaaggtagaaggagtggaagttatc
aaggagaagaaaaaggagaaagaagacaaagaagaagaaaaggataaagatgttagcaat
tttgatcagaacaaactggaagaggaaatgagaaaacgaaaagagagagtggagaaatgg
agagaagaacaacgtaagaaagcaatggaaaatataggagaactgaaaaaagaaattgaa
gaaatgaagcaaggaaagaaatggagcttagaagatgatgatgatgatgatgaggaaact
gcagaaggggagaaggaaggtaatgagattgaagatgaagaactggatccattagatgca
tacatggaagaagtcaaagaggaggtcaagaaatttaatatgaggagtgtaaaaggtgga
ggtggaagtgaaaaaaaaactgggccaaccgttactaaagtagtaactgtggttaaaaca
aaaaaagcgtctccagagacagaaaagaaaaaaggcgagctcatggtgaacgaccaagat
gcaatggagtattcctctgaagaggaggaagttgaccttcagactgcattaacaggctat
cagaccaaacataggaaactgctggaaccagttgatcatgggaagattgaatatgagccc
tacaggaaaaacttctatgttgaagttccagaactagctaaaatgactcaagaagaggtg
aatgcatatagactggaattggaaggaattactgtcaagggtaaaggatgtcctaagcca
atcaaaacttgggtgcagtgtggcatttctatgaaaatactgaattccctgaaaaagcat
gggtatgaaaaacctacccccatccaggctcaggctatacctgcaattatgaatggacgt
gatttaattggcatagctaaaacaggaagtgggaagactattgcttttctgttgcccatg
ttcaggcacattatggatcagaggcaattagaagaaggagaaggtccaatagctgtcatc
atgactcctactcgagagctggctttacagattacaaaggagggtaagaagttctcaaag
acgcttgggcttcgagttgtgtgtgtatatggaggaacaggaataagtgaacagattgct
gaactgaaaagaggtgctgaaataattgtttgcacacccggtcgtatgattgacatgtta
gcagctaataatggtcgggtgacaaatcttcggagagtgacatatgttgtccttgatgaa
gctgatagaatgtttgacatgggctttgagcctcaggtaatgcgcattgtagacaatgta
aggcctgatcgccagactgttatgttctctgctaccttccctagagctatggaggcttta
gctcgtcgaattttaagcaagccaattgaggtccaggttggtggcaggagtgttgtctgt
tctgatgtagaacagcaagtgattgtcatagaggaagataacaagttcttgaagctgctt
gaactcctgggacattatcaggaaaaaggagctgtcatcatttttgtagataagcaagaa
catgctgatggattactgaaagacttaatgagagcctcttatccctgcctgtcacttcat
ggaggtattgatcagtatgatagagacagcataatcaatgattttaagagtggagtctgc
aaacttcttgtggccacatctgtagcagcccgaggccttgatgtaaaacaccttgtgctt
gttatcaactacagttgtcccaatcattatgaggattatgtacacagggcaggtagaact
ggacgagcaggcaacaaaggatatgcatatactttcattactgaagatcaagcacgatat
gcaggtgatataattaaagctctggagttgtcaggtactccagttcctgcagagttggag
aaactttggaatgatttcaaagatcaacagaaggctgagggaaagacaattaaaaagagc
agtggtttctctggcaaagggttcaaatttgatgaaacggaggaggctttggctaatgag
cgaaagaaactacaaaaagcagcacttggcttgcaagattctgatgatgaggatacagca
gttgatattgatgaacagattgaaagcatgttcaattcaaagaaaagagttaaggacatg
gcatcatcaggcggaacatctaatgttcctgccccaactgctggaaatgcagaaaaatta
gaaattgctaagaggttggcattgagaatcaatgcacagaagaatcttggagccgaggca
caagtattggtctcttttcaatttaaggatgtgatgcagcaagcgacaaacgctatcctg
agaggtggtacaattcaagctccaactgtgtctgctaaaaccatagctgagcagctggct
gagaagatcaatgccaagctcaattatgtgccgttagagaaacaagaggaggaaaaacag
gaagggggacaaaatgagtcttttaagagatatgaggaagaattggagatcaatgacttt
ccacagactgctaggtggaaggtaacgtcaaaggaagcactgcacagaataagtgaatat
tctgaagccgccattaccatcagaggaacatattttcctccaggcaaagagcccaaggag
ggagaacgaaaaatttacttggccatagagagtgccaatgaattagctgtgcagaaagca
aaagcagaaatcactagactcatcaaagaggagctcatcagattgcaaaattcataccaa
ccaaccaacaaaggaagatacaaagttttataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (48)   
   KEGG ORTHOLOGY (1)   
   RefGene (44)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (58)   

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