KEGG   Geobacillus kaustophilus: GK1168
Entry
GK1168            CDS       T00217                                 
Name
(GenBank) DNA-directed RNA polymerase omega subunit (transcriptase omega chain)
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
gka  Geobacillus kaustophilus
Pathway
gka03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:gka00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    GK1168
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gka03021]
    GK1168
   03400 DNA repair and recombination proteins [BR:gka03400]
    GK1168
Enzymes [BR:gka01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     GK1168
Transcription machinery [BR:gka03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     GK1168
DNA repair and recombination proteins [BR:gka03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      GK1168
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: BAD75453
UniProt: Q5L0S7
Position
1188301..1188501
AA seq 66 aa
MLYPSIDLLMQKVDSKYKLVTVVAKRARELQDGAELMVKKPVSKKFVGQALEEIAGDKVE
LVEEEK
NT seq 201 nt   +upstreamnt  +downstreamnt
atgctgtatccttccatcgatttgctgatgcaaaaagtcgattcgaaatacaagctcgtc
acggtggtggccaaacgggcgcgcgagctgcaggacggtgcggagttgatggtgaaaaag
ccggtgtcgaaaaaatttgtcggccaggcgctcgaggaaatcgctggtgacaaggtcgaa
ttagtggaggaggaaaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (1)   
   Pfam (1)   
All databases (16)   

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