KEGG   Geobacillus kaustophilus: GK3085
Entry
GK3085            CDS       T00217                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
gka  Geobacillus kaustophilus
Pathway
gka03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:gka00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    GK3085
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gka03400]
    GK3085
DNA repair and recombination proteins [BR:gka03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     GK3085
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      GK3085
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_16 AAA_29 nSTAND1 RsgA_GTPase AAA_25 AAA_22 AAA_21 APS_kinase nSTAND3 AAA_33 AAA_23 AAA_18 ATPase DnaJ_CXXCXGXG NACHT BCA_ABC_TP_C ATPase_2 MeaB cobW MMR_HSR1 NB-ARC Viral_helicase1 NTPase_1 RNA12
Other DBs
NCBI-ProteinID: BAD77370
UniProt: Q5KVB6
Structure
Position
complement(3103967..3106834)
AA seq 955 aa
MNGMDKIVVKGARAHNLKNIDVEIPRGKLVVLTGLSGSGKSSLAFDTIYAEGQRRYVESL
SAYARQFLGQMEKPDVDAIEGLSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLFARIGR
PICPTHGIEIQSQTIEQMVDRLLAYPERTKMQILAPIVSGKKGTHAKTLEDIRKQGYVRV
RIDGEMRELTEDIELEKNKKHSIDVVVDRIIIKDGIAARLADSLETALKLADGKVVVDVI
GEGELLFSEKHACPYCGFSIGELEPRLFSFNSPFGACPDCDGLGAKLEVDLDLVIPNDEL
TLKEHAIAPWEPQSSQYYPQLLEAVCRHYGIPMDVPVRDLPKEQLDKILYGSGGEPIYFR
YTNDFGQVREQYIAFEGVIPNVERRYRETSSDYIREQMEKYMAEQPCPTCQGYRLKKESL
AVLVGGKHIGEVTAMSVTEALAFFDGLELTEKEAQIARLILREIRDRLGFLQNVGLDYLT
LSRSAGTLSGGEAQRIRLATQIGSRLTGVLYVLDEPSIGLHQRDNDRLIATLKSMRDLGN
TLIVVEHDEDTMLAADYLIDIGPGAGIHGGEVVAAGTPEEVMNDPNSLTGQYLSGKKFIP
IPAERRRPDGRWLEVVGAREHNLKNVSVKIPLGTFVAVTGVSGSGKSTLVNEVLYKALAQ
KLHRAKAKPGEHRGIRGLEHLDKVIDIDQSPIGRTPRSNPATYTGVFDDIRDVFASTNEA
KVRGYKKGRFSFNVKGGRCEACHGDGIIKIEMHFLPDVYVPCEVCHGKRYNRETLEVTYK
GKNIAEVLDMTVEDALDFFASIPKIKRKLETLYDVGLGYMKLGQPATTLSGGEAQRVKLA
AELHRRSNGRTLYILDEPTTGLHVDDIARLLDVLHRLVDNGDTVLVIEHNLDVIKTADYI
IDLGPEGGDRGGQIVAVGTPEEVAEVEESHTGRYLKPILERDRARMQAQYEAVKA
NT seq 2868 nt   +upstreamnt  +downstreamnt
atgaacggaatggataaaattgtcgtcaaaggggcgcgcgcccacaacttgaaaaacatt
gacgtcgaaatcccgcgcggcaagctcgtcgtcttgaccgggctgtccgggtcggggaag
tcgtcgctggcgtttgatacgatttacgcggaaggccagcgccgctacgtcgaatcgctg
tcggcgtatgcccgccagtttttagggcagatggaaaaaccggacgtcgatgcgattgaa
gggttgtcgccggccatttcgatcgatcaaaaaacgacgagccgcaacccgcgctcaacc
gtcggcacggtgacggaaatttacgattatttacggctgctgttcgcccgcatcggccgc
cccatttgcccgacgcacggcattgaaatccaatcgcagacgatcgagcaaatggtcgac
cggctgctcgcttacccggagcggacgaaaatgcaaattttggcgccgatcgtctcggga
aaaaaagggacgcacgccaagacattggaggatattcgcaaacaagggtatgtgcgcgtc
cgcattgacggcgagatgcgcgagttgacggaggacattgagctggaaaaaaacaaaaaa
cattcgattgatgtcgtcgtcgaccgcatcatcatcaaagacggcatcgccgccaggctt
gccgattcgcttgagacggcgctgaagctcgccgacggcaaagtggtcgttgacgtgatc
ggcgagggggagctcttgttcagcgaaaagcacgcttgtccgtactgcggcttttcgatc
ggggagcttgaaccgcgtctgttttcgttcaacagtccattcggcgcctgcccggactgc
gacgggctcggggcgaagctcgaagtggatctcgatttggtcatcccgaacgatgagctg
acgttaaaagaacacgccatcgctccgtgggagccgcaaagctcgcaatattacccgcag
ctgctcgaagccgtgtgccgccattacggcatcccgatggacgtgccggtcagagatttg
ccaaaagagcagctcgataaaattttgtacggcagcggcggggagccgatttacttccgc
tatacgaatgatttcgggcaagtgcgcgaacaatacatcgcatttgaaggcgtcattccg
aacgtcgaacgccgctatcgcgagacgagctcggactacatccgcgagcagatggaaaag
tatatggcggaacaaccatgtccgacatgccaaggctaccggctgaaaaaagaaagcctg
gccgtccttgtcggcggcaagcatatcggcgaggtcaccgccatgtcggtgaccgaggcg
ctcgccttttttgacgggctcgagctgaccgaaaaagaagcgcaaatcgcccgccttatt
ttgcgtgaaattcgcgaccggctcggctttttgcaaaacgtcggcctcgactatttgacg
ctcagccgctcggcaggaacgctctccggcggcgaggcgcagcgcatccgcttggcgacg
cagatcggctcgcggctgacgggggtgctgtacgtgctcgacgagccgtcgatcgggctt
catcagcgcgacaacgaccggctgatcgcgacgttgaaaagcatgcgcgacctcggcaat
acgctcattgtggtggagcacgacgaggataccatgctggccgcggactatttgattgac
attggtccgggggcgggcatccacggcggcgaggtcgtcgccgccggcacgccggaagaa
gtgatgaacgacccgaactcgctcaccggccagtatttatcggggaaaaaattcatcccg
attccggccgagcgtcgccgtccggacggacgttggcttgaggtcgtcggcgcgcgcgag
cataacttgaaaaacgtatcggtgaaaatcccgctcggcacgtttgtcgctgtcaccggg
gtgtcgggctcgggcaaaagcacgctcgtgaacgaagtgttgtataaggcgctggcgcaa
aagctgcaccgggcgaaggcgaaaccgggcgaacatcgcggcatccgcgggctggagcat
ctcgataaagtcattgacatcgaccagtcgccgatcggccgcacgccacgctcgaacccg
gcgacgtacaccggggtgtttgacgacatccgcgacgtgtttgcctcgacgaacgaagcg
aaagtgcgcggctacaaaaaagggcggttcagcttcaatgtcaaaggcgggcgctgcgag
gcgtgccatggcgatggcatcatcaaaattgagatgcactttttgccggacgtgtacgtc
ccgtgcgaagtgtgccacggcaaacggtacaaccgcgagacgctcgaggtgacgtataaa
ggaaaaaacatcgccgaggtgctcgacatgacggtcgaagatgcgctcgactttttcgcc
tcgatcccgaaaatcaaacgcaagctcgagacgctctatgacgtcgggctcggttatatg
aagctcggccagccggcgacgacgctctcgggcggcgaggcgcagcgcgtcaagctcgcc
gctgagcttcaccgccgctccaacggccggacgctctacattttggacgagccgacgacc
gggcttcatgtcgatgacatcgcccggctgcttgatgtgctccaccggctcgtcgacaac
ggcgataccgtgcttgtcattgaacataacttggacgtcatcaaaaccgcggactatatc
attgacttaggtccggaaggcggcgaccgaggcggacaaatcgtcgctgtcggcacgccg
gaagaggtggccgaggtggaggagtcgcacaccggccgctacttaaaaccgattctcgag
cgcgaccgggcgcgcatgcaggcgcaatatgaagcggtgaaggcgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (51)   
   KEGG ORTHOLOGY (1)   
   RefGene (48)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
3D Structure (1)   
   PDB (1)   
Protein domain (28)   
   Pfam (28)   
All databases (85)   

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