KEGG   Glarea lozoyensis: GLAREA_10933
Entry
GLAREA_10933      CDS       T04883                                 
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase
  KO
K13025  ATP-dependent RNA helicase [EC:5.6.2.7]
Organism
glz  Glarea lozoyensis
Pathway
glz03013  Nucleocytoplasmic transport
glz03015  mRNA surveillance pathway
glz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:glz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    GLAREA_10933
  09122 Translation
   03013 Nucleocytoplasmic transport
    GLAREA_10933
   03015 mRNA surveillance pathway
    GLAREA_10933
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:glz03019]
    GLAREA_10933
   03041 Spliceosome [BR:glz03041]
    GLAREA_10933
   03009 Ribosome biogenesis [BR:glz03009]
    GLAREA_10933
   03012 Translation factors [BR:glz03012]
    GLAREA_10933
Enzymes [BR:glz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     GLAREA_10933
Messenger RNA biogenesis [BR:glz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     GLAREA_10933
   mRNA cycle factors
    Stress granule specific factors
     GLAREA_10933
Spliceosome [BR:glz03041]
 Complex C
  Other components
   EJC/TREX
    GLAREA_10933
Ribosome biogenesis [BR:glz03009]
 Eukaryotic type
  90S particles
   Helicases
    GLAREA_10933
Translation factors [BR:glz03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    GLAREA_10933
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_30 TniB Flavi_DEAD AAA_22
Other DBs
NCBI-GeneID: 19469977
NCBI-ProteinID: XP_008077315
UniProt: S3DTH0
Position
Unknown
AA seq 399 aa
MADGIDRKADERMEFSTSKDVTVIPTFDDMHLKETLLRGVYAYGYESPSAVQSRAIVQIC
KGRDTIAQAQSGTGKTATFSISMLQVIDTAVRETQALVLSPTRELATQIQSVVMGLGDYM
NVQCHACIGGTNVGEDIRKLEYGQHIVSGTPGRVADMIRRRNLRTRHIKMLVLDEADELL
NRGFREQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRILVKRDELTLEGLKQ
YFIAVEKEEWKFDTVCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQ
KERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGR
KGVAINFVTSEDVRILRDIELYYSTQIEEMPMNVADLLA
NT seq 1200 nt   +upstreamnt  +downstreamnt
atggcagacggaatcgatcgcaaagctgatgagcgcatggagttctcgacatcgaaagat
gtcactgtcattccaacctttgatgatatgcacctgaaggaaactcttcttcgaggagtc
tacgcatacggatatgagtccccttcagctgttcaatcgcgtgctattgtacaaatctgc
aaaggtcgcgatactattgcccaggcgcaatccggtactggtaaaacggctaccttttcc
atcagtatgcttcaagtcatcgacaccgccgttcgcgaaacccaagcgctcgtgttgtca
cccactcgagaactcgcgacacaaattcaatcggtggttatgggactgggagattacatg
aatgttcaatgtcatgcatgcattggtggaacaaacgttggggaggatattcgcaagctg
gagtatggacagcatatcgtctctggtacccctggacgagttgcggatatgattcggcgt
cgtaatcttcgaactcggcatatcaagatgttggtactcgatgaagcggatgaactgttg
aaccgcggattcagagagcagatttacgatgtttaccgataccttcctccagccactcag
gtcgtggttgtttctgctactctcccttacgatgttctggatatgacaaccaagtttatg
acggaccccgtcaggatcctggtcaagcgtgatgaattgacgctggaaggattaaagcaa
tatttcattgcagtcgagaaggaggaatggaagtttgacaccgtctgcgatctctacgat
actctcaccatcactcaagctgtcatcttttgcaatactcgccggaaggtcgactggttg
accgataaaatgcgagaagccaatttcacagtatcatcaatgcacggagagatgccacag
aaggaaagagatagcatcatgcaagatttccgtcaaggcaactccagggttctgatatcc
acagacgtttgggctcgtggtattgatgtccagcaagtttctttggttatcaactatgat
ctccctagcaatcgtgagaactacatccaccgcatcggtagatctggtagatttggacga
aaaggtgttgcgatcaattttgtcacgagcgaggatgtgaggatcttgcgagatattgag
ttgtactactctactcaaatcgaagaaatgccaatgaacgttgcagatctactggcataa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (49)   

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