KEGG   Geobacter metallireducens: Gmet_0872
Entry
Gmet_0872         CDS       T00295                                 
Symbol
nifS-2
Name
(GenBank) nitrogen fixation iron-sulfur cluster assembly cysteine desulfurase NifS
  KO
K04487  cysteine desulfurase [EC:2.8.1.7]
Organism
gme  Geobacter metallireducens
Pathway
gme00730  Thiamine metabolism
gme01100  Metabolic pathways
gme01240  Biosynthesis of cofactors
gme04122  Sulfur relay system
Brite
KEGG Orthology (KO) [BR:gme00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    Gmet_0872 (nifS-2)
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04122 Sulfur relay system
    Gmet_0872 (nifS-2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:gme03016]
    Gmet_0872 (nifS-2)
   03029 Mitochondrial biogenesis [BR:gme03029]
    Gmet_0872 (nifS-2)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:gme02048]
    Gmet_0872 (nifS-2)
Enzymes [BR:gme01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.7  cysteine desulfurase
     Gmet_0872 (nifS-2)
Transfer RNA biogenesis [BR:gme03016]
 Eukaryotic type
  tRNA modification factors
   Thiolation factors
    Gmet_0872 (nifS-2)
 Prokaryotic type
    Gmet_0872 (nifS-2)
Mitochondrial biogenesis [BR:gme03029]
 Mitochondrial quality control factors
  Regulator of mitochondrial biogenesis
   Proteins involved in Fe-S cluster biogenesis
    Gmet_0872 (nifS-2)
Prokaryotic defense system [BR:gme02048]
 DNA phosphothiolation system
  Sulfur modification proteins
   Gmet_0872 (nifS-2)
SSDB
Motif
Pfam: Aminotran_5 DegT_DnrJ_EryC1 Beta_elim_lyase
Other DBs
NCBI-ProteinID: ABB31114
UniProt: Q39XB0
Position
960680..961822
AA seq 380 aa
MMIYLDHNATTPVHPDVVEALLPFLQGKFGNPSSIHWAGRAVKGAVEEAREQVSALVGCE
PGEVVFTSSGTEADNMAIKGVAAALGGRGNHIVTTQVEHPGVANPCLYLESLGFEVTRVT
VDRDGLLDLERLEAAITDRTILISAMAANNETGVLFPVREIGEIAACRRVYFHCDGVQAA
GRIPLSVRDDSISFLALSGHKLYAPKGIGALVVRRGVKCHPLIHGGSQERNRRGGTENVA
GIVAFGRACAIARETMNGEMGRIKGLRDRLEEGILSRVSGACVNGHREQRLPTTTNITIP
GVEADSLLMALDLEGIAASSGSACSSGTLKLSPVLAAMGRTPEEAKGSVRFSLGKGNTVE
EIDRVLAVLPAIVARLRGES
NT seq 1143 nt   +upstreamnt  +downstreamnt
atgatgatctatctggaccacaatgcgacaacgccggtccaccctgatgtggtggaggcg
ttgttgccgtttctgcaggggaagttcggcaacccgtccagcatccactgggccggtcgg
gccgtgaagggggcggtggaggaggcccgggaacaggtgtcggcgctcgtgggatgcgag
ccgggtgaggtggtgttcacctcgtcgggaaccgaggccgacaacatggccatcaagggg
gtcgctgcggcccttggggggcgcggcaaccacatcgtcaccacccaggtggagcaccca
ggagtggcaaacccctgcctctacctggagagtctcggtttcgaggtgacccgcgtgacc
gtggaccgggacggccttctggacctggagcggctggaggcggccatcaccgaccggacc
attctcatctcggccatggccgccaacaacgagaccggcgtcctcttcccggtacgcgag
atcggtgagattgcagcgtgccgccgtgtctatttccactgcgacggggtccaggcggcc
ggcaggattccactctcggtccgggatgacagcatctcgtttctggccctctcggggcac
aagctctatgccccgaaggggataggagccttggtggtgcggcgcggggtgaagtgccac
ccgctgatccatggtggctcccaggagcgcaaccgccgcggagggaccgagaacgtggcc
ggcatcgtggcctttggcagggcgtgcgccattgcccgcgaaaccatgaatggcgaaatg
gggcggattaaaggattgcgcgaccggttggaagaggggatactgtcacgggtttccggc
gcctgcgtgaacggccaccgggagcagcggctccccaccactaccaatatcacgattccc
ggtgtggaggccgattcgctcctcatggcactggacctggaggggatagctgcgtcatcg
ggctccgcgtgcagttccggcaccctcaagctctcgccggtcctggccgccatgggacgc
actcccgaggaggccaagggttcggtgcggttctcgctggggaaggggaataccgtcgag
gagatagaccgggtgctggcggttctgccggccatcgttgcccggttgcggggagaatca
tga

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (27)   

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