KEGG   Glycine max (soybean): 100499661
Entry
100499661         CDS       T01710                                 
Name
(RefSeq) uncharacterized protein LOC100499661
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
gmx  Glycine max (soybean)
Pathway
gmx03020  RNA polymerase
gmx03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:gmx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    100499661
  09124 Replication and repair
   03420 Nucleotide excision repair
    100499661
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gmx03021]
    100499661
   03400 DNA repair and recombination proteins [BR:gmx03400]
    100499661
Transcription machinery [BR:gmx03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     100499661
DNA repair and recombination proteins [BR:gmx03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      100499661
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 100499661
NCBI-ProteinID: NP_001237937
UniProt: C6SV83
Position
16:complement(9892326..9898680)
AA seq 138 aa
MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQTSDDPMNQISQVFEKSLQ
YVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMVPSIKSRGRAQD
DEAIEKMLNDLSLIKKFE
NT seq 417 nt   +upstreamnt  +downstreamnt
atgtccggggaagaggaagaaaacgccgcagagctcaaaattggagacgagtttttgaag
gcaaagtgcttaatgaactgtgaagtttcattgattcttgagcacaagtatgagcagctt
caacagacatctgatgatcccatgaatcaaatttctcaggtatttgaaaagtcactgcag
tatgtgaaacgtttcagtcgctataaaaatcctgatgctgtcagacaagttcgagaaatt
ctcgcaagatatcaattggctgagtttgagttgtgtgtccttggcaacctttgcccagaa
actgtggaggaagctattgctatggttccatctatcaagtcaagaggacgagctcaggat
gatgaagcaatcgagaaaatgttaaatgacctgtcgttgattaagaaatttgaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (17)   

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