KEGG   Glycine max (soybean): 100778294
Entry
100778294         CDS       T01710                                 
Name
(RefSeq) uncharacterized protein LOC100778294
  KO
K14568  rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260]
Organism
gmx  Glycine max (soybean)
Pathway
gmx03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:gmx00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    100778294
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:gmx03009]
    100778294
Enzymes [BR:gmx01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.260  rRNA small subunit pseudouridine methyltransferase Nep1
     100778294
Ribosome biogenesis [BR:gmx03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    100778294
SSDB
Motif
Pfam: EMG1
Other DBs
NCBI-GeneID: 100778294
NCBI-ProteinID: NP_001239919
UniProt: C6TAF1
Position
11:7517268..7519931
AA seq 282 aa
MTRPFGVKGGRKRKHAEPKYDAHDEEEEEETQPKKTVVEVEHNQEEEEETPAPAPEDDGL
SGIPIAPSANNTNKPNVIFILEKASLEVAKVGKTYQLLNSDDHANFLRKNNKNPGDYRPD
ITHQSLLSILDSPLNKAGRLRSVYIRTEKGVLIEVKPFVRIPRTFKRFAGVMLELLQKLS
ISAVGKREKLLRTIKNPVTQYLPINSRKIGLSYSSEKLVDMDDYVSTVTSNMDLVFVVGA
MAHGKIETDYTEDYVAISGYPLSAAYCITRITGALERKWKIL
NT seq 849 nt   +upstreamnt  +downstreamnt
atgacgcggcctttcggtgtgaagggggggaggaagcgaaagcacgcggaacccaaatac
gacgcccatgacgaagaagaagaagaagaaacgcaaccaaagaaaactgtggtggaggtg
gagcacaaccaagaagaagaagaagaaactccagcaccagcaccagaggatgatggattg
agcggtatcccaattgcgcccagtgcgaacaacactaacaaacccaacgtcatcttcatt
cttgaaaaagcttctttggaagtcgccaaagtcggcaagacatatcagctcttaaactcc
gacgaccatgccaatttcctccgcaaaaataacaagaatcccggagattacaggcctgac
attactcatcagtcccttctatcaattttggatagcccactaaataaagctgggagattg
cgatcagtatacataaggactgaaaaaggtgttcttatagaggttaagccctttgttcgt
attccaagaacattcaaacgctttgctggtgtcatgttggaactgcttcaaaaattgagc
atatctgctgttggcaagcgagagaaacttctccgaaccatcaaaaaccctgtcacacag
tatttgcctatcaactcacgaaaaataggtctatcatatagttcagaaaagcttgtagat
atggatgactacgtatcaactgttaccagcaatatggaccttgtctttgtggttggagca
atggcccatgggaagattgagacagattatacagaagattatgtagcaatttcggggtac
cctctaagtgctgcttattgtattacaaggattactggcgcccttgagagaaagtggaag
attttgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (24)   

Download RDF
DBGET integrated database retrieval system