KEGG   Glycine max (soybean): 100782507
Entry
100782507         CDS       T01710                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
gmx  Glycine max (soybean)
Pathway
gmx03013  Nucleocytoplasmic transport
gmx03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gmx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100782507
  09122 Translation
   03013 Nucleocytoplasmic transport
    100782507
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gmx03019]
    100782507
   03041 Spliceosome [BR:gmx03041]
    100782507
Messenger RNA biogenesis [BR:gmx03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     100782507
Spliceosome [BR:gmx03041]
 Complex C
  Other components
   EJC/TREX
    100782507
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    100782507
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 eIF2A NBCH_WD40 Nup160 PROPPIN CNH P22_AR_C
Other DBs
NCBI-GeneID: 100782507
NCBI-ProteinID: XP_003532202
UniProt: I1KYS6
Position
8:44688763..44693210
AA seq 313 aa
MEEQIPFKNLHSREYSGHKKKVHSVAWNCIGTKLASGSVDQTARIWHIEPHGHGKVKDIE
LKGHTDSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGT
HVAVGNRDDELTILDVRKFKPIHRRKFNYEVNEISWNMTGEMFFLTTGNGTVEVLSYPSL
RPLDTLMAHTAGCYCIAIDPVGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTIGF
NYSGDFIASASEDLFIDISNVHTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKNKHQA
DEGVFRIFGFKNA
NT seq 942 nt   +upstreamnt  +downstreamnt
atggaggaacaaatcccatttaagaatctccatagcagagagtattcgggtcacaagaag
aaggtgcactctgtggcttggaattgcattggcacaaaacttgcttctggttccgtggac
caaactgcgcgaatatggcatattgagccacatgggcatggcaaggtcaaagatattgaa
ttgaaaggtcacactgatagtgtggatcagctatgctgggaccccaaacatgctgatttg
attgcaactgcatcgggtgacaagactgttcgtttgtgggatgctcgaagtggaaaatgc
tctcaacaggcggaacttagtggggagaatattaacatcacttacaaacctgatgggact
catgtagctgttggtaacagggatgatgaattaacaatactggatgttcggaagttcaaa
ccaattcataggcgcaagttcaattatgaggtaaatgagatttcttggaacatgacgggt
gagatgttctttctaacaacaggaaatgggactgtggaagttctctcttacccatctctt
cgacctcttgacactctcatggcccatacagctggttgttattgcatcgcaattgatcca
gtaggaagatattttgctgttggaagtgctgattcccttgtaagtctgtgggatatatca
gagatgctctgcgtgcgtaccttcacaaagctggaatggcctgtccggacaattggcttc
aattattctggagattttattgcttctgcaagtgaagacttgttcattgatatttcaaat
gttcatactggaagaacagtgcatcaaattccttgtagggctgctatgaacagtgttgag
tggaatcctaaatacaatttacttgcatatgctggtgatgacaaaaacaagcatcaggct
gatgaaggtgtttttcgcatttttggttttaaaaatgcttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (8)   
All databases (30)   

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