KEGG   Glycine max (soybean): 100783866
Entry
100783866         CDS       T01710                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 1 isoform X1
  KO
K03125  transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1]
Organism
gmx  Glycine max (soybean)
Pathway
gmx03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:gmx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    100783866
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:gmx01001]
    100783866
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gmx03021]
    100783866
   03036 Chromosome and associated proteins [BR:gmx03036]
    100783866
Enzymes [BR:gmx01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.1  Transferring groups other than aminoacyl groups
    2.3.1.48  histone acetyltransferase
     100783866
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     100783866
Protein kinases [BR:gmx01001]
 Serine/threonine kinases: Other
  TAF1 family
   100783866
Transcription machinery [BR:gmx03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     100783866
Chromosome and associated proteins [BR:gmx03036]
 Eukaryotic type
  Histone modification proteins
   HATs (histone acetyltransferases)
    100783866
SSDB
Motif
Pfam: DUF3591 Bromodomain ubiquitin TBP-binding Rad60-SLD zf-CCHC_6
Other DBs
NCBI-GeneID: 100783866
NCBI-ProteinID: XP_006578382
UniProt: K7KJP5
Position
4:15088213..15130561
AA seq 1889 aa
MGYDSDSPSQDGRDEDDEEEYEESGKGNRFLGFMFGNVDNSGDLDVDYLDEDAKEHLSAL
ADKLGPSLTDIDLSGKSPQTPPDVVEQGCDVKAEDAVDYEDIDEEYDGPETEAANEEDYL
LPKKEFFSAEASVCLESKASVFDDENYDEDSEKEQDFVNDDCKVDNIPLAGEQKESFVDA
SKEESSLEHELHVDSPQTEELDADVQKLEEESPEVPKRSMAMPLPVLCVEDGVTILRFSE
IFGIHEPLRKGEKREHRHSIPRDRYKSLDLIDDFIEEDEEEFLKGFSQSLSLTKQVCVVH
NDVSESNDVDLEFPKFGFLLADASVARKDDHQSKDSCHSAEPMKGDFAEDHSRKDHPFML
ANFYPLDQQDWEDEILWGNSPVPSNNNVESCEISGPELGASGGSEIEIESGIQSIQMEPQ
KKLEDKDHNVLMCSSPVKVEPFGSWDSFGAKTNLISRSLFHPQLLRLESRSEVDSSSLAD
GREAEISEHNQSGQVKRFTKVISQNRDMMEGSWLDKIIWEELDQPMVKPKLIFDLQDDQM
HFEVLDSKDGTHLRLHAGAMILTRSLQSISGDSSELPGHGSQYGWRHVANDKHYSNRKTS
QQLKSNSKKRSAHGVKVFHSQPALKLQTMKLKLSNKDIANFHRPKALWYPHDNEVAVKEQ
GKLPTQGPMKIIIKSLGGKGSKLHVDAEETLSSVKAKASKKLDFKVSETVKIFYLGRELE
DHKSLAAQNVQPNSLLHLVRTKIHLWPKAQRVPGENKSLRPPGAFKKKSDLSVKDGHVFL
MEHCEERPLLLSNVGMGARLCTYYQKCSPDDQSGSLLRNTDNSLGHIISLDPADKSPFLG
DLKPGCTQSSLETNMYRAPVFPHKVPLTDYLLVRSSKGKLSLRRIDKINVVGQQEPLMEV
LSPGSKNLQNYMINRLLVHMCREFQAAEKRHMPPYIRVDEFLSQFPYQSEASFRKKIKEY
ANLQRGTNGQSILVKKRNFRIWSEDELRKMVTPELVCAYESMQAGLYRLKHLGITETHPT
NISSAMSRLPDEAIALAAASHIERELQITPWNLSSNFVACTSQGKENIERMEITGVGDPS
GRGMGFSYARAPPKAPVSSAMVKKKAAANRGGSTVTGTDADLRRLSMDAAREVLLKFNVP
DEVIAKQTRWHRIAMIRKLSSEQATSGVKVDPTTISKYARGQRMSFLQLQQQTREKCQEI
WDRQVQSLSAVNGDENESDLEGNSDLDSFAGDLENLLDAEECEEGEESTNDLKRDKGDGV
KGLKMRRHPTLAQAEEEIEDDAAEAAELCRLLMDDDEADKKKKKKAKVIVGEARLVPKMQ
SKFSFDNAEQVKQITNTLQLDGTNHWKEDAITDLREEENFPTKKSKSLKVNKVKKNDITP
ISIPNKKIKLNMGEGIKNQVFKEKKPSRETFVCGACGKAGHMRTNKNCPKYGEDLETQLE
STDMEKSSGKSSFVDPSSLSQHKAPSKKSMSKGTTKIAPVDNSSKIPLKFKCSSTEKSSD
KPAIESLQSSDKPVTSDSETAKSAKVNKIIIPKKVKPDDTQAESGKHAIVIRPPTDSGRG
QVDSHKFPIKIRPPTEIDREQNHKKIVIKRTKEVIDLELDSPGGNTGLQHRKTKRIVELS
NFEKQKKQETVYGTEGFKKWNSKEDRRWQEEQEKWRNDARLREEDRARRHRKEEIRMLKE
QERLDEIKRFEEDIRREREEEEQQKAKKKKKKKPELRDEYLDDLRARRHDKRMPERDRSG
KRRSITELGKIGADYMPPTKRRRGGGGEVGLANILESVVDTIVKDRYDLSYLFLKPVSKK
EAPDYLDIIERPMDLSRIRERVRNMEYKSREDFRHDMWQITFNAHKYNDGRNPGIPPLAD
MLLEYCDYLLNENDDSLTEAETGIEIRDF
NT seq 5670 nt   +upstreamnt  +downstreamnt
atgggttacgattcggatagcccctcgcaagatgggagggacgaagacgacgaagaagaa
tatgaggagtctggcaagggtaatcgttttcttgggttcatgtttggaaatgttgataat
tctggtgatctcgatgttgattatcttgatgaggatgcaaaggagcatctttctgcatta
gctgataagctgggtccgtcactgacagatatagatttgtcaggaaaatcaccacaaaca
ccacctgacgttgttgaacaaggctgtgacgtaaaagctgaagacgctgttgattatgaa
gatattgatgaagagtatgatggtccagagacagaagctgccaatgaagaagactattta
ttgccaaaaaaagaatttttctctgctgaagcctctgtatgtttggaatccaaagcttct
gtctttgatgatgaaaattatgatgaagattctgaaaaggagcaagactttgtgaatgac
gattgtaaagttgataacatccctttagctggggagcagaaagagagttttgtggatgca
tctaaagaagagagttcacttgaacatgaattacatgttgactcaccgcagactgaagaa
ttggatgctgatgtacaaaagcttgaggaggaaagccctgaagttccgaaaaggtctatg
gctatgccattgcctgttttatgtgtggaagatggtgtgacaattttacgtttctctgaa
atctttggcattcatgaacctctcagaaagggagaaaagagagagcatcgacattctatt
cctagagatagatacaagtctttggatttaattgatgattttatagaagaggatgaagag
gaattcctcaagggcttctcccagagtctctcacttactaaacaggtttgtgtagttcat
aatgatgtatcagaaagcaatgatgttgacttggagtttccaaaatttggatttcttctt
gcggatgcctcagtggccaggaaagatgatcatcaatcaaaggactcatgccatagtgct
gaaccgatgaaaggggattttgcagaagatcattcacggaaagatcatcctttcatgttg
gccaacttttatcctcttgatcagcaagactgggaagatgaaatcctttggggcaattct
ccagttccaagtaataataatgttgaaagctgtgaaatttctggacctgagttgggagct
tctggtggcagtgaaatagaaatagaaagtgggatccagagtattcagatggagcctcag
aagaaactggaggataaagatcataatgtcttaatgtgcagctctcctgtcaaagtggag
ccctttggctcatgggattcttttggagctaagaccaatttaatatccagaagtctattt
cacccccaacttctaaggctagaatccagatctgaagtggatagttctagtcttgcagat
ggaagagaggcggagatatcagagcataatcaaagtggtcaagtaaagcgttttaccaag
gttatatcacaaaacagagacatgatggagggctcctggttagacaagataatatgggag
gagcttgatcagcctatggtgaaaccaaagcttatttttgatcttcaggatgatcaaatg
cactttgaagttttagatagcaaggatggtacacatcttcgccttcatgctggggctatg
attttaactcgttctttacaatcaatcagcggggattcttctgagctaccagggcatgga
agtcaatatggatggcgacatgttgctaatgacaaacactattcaaaccgtaaaacttct
cagcagctgaaatcaaattccaaaaaacgctcagctcatggtgtcaaagtttttcactca
caacctgcactgaagctgcagacaatgaaattgaaattgagcaataaagatattgcaaat
tttcaccggccaaaagcattatggtatccccatgacaatgaggtggctgtcaaagaacaa
gggaaattgccaacacaaggacccatgaaaattattataaagagtttgggtggcaagggg
agtaaattgcatgtcgatgctgaagaaactctctcttctgttaaagcaaaagcttccaaa
aagctagattttaaggtatcagaaacagtgaaaatattttacttaggaagggagcttgaa
gatcacaagtcacttgctgcacaaaatgttcaaccaaactccttgttacatcttgttcgt
acaaagatacatttgtggccaaaagcacaaagggttcctggtgagaacaagtccttgcgt
cctcctggggcattcaagaaaaagtctgatctgtcagtaaaagatggacatgtttttctg
atggagcattgtgaagaaaggcctttacttttgagcaatgttggaatgggtgcaagactt
tgtacatactatcaaaaatgctcaccagatgaccaatctggctccttattacgcaacaca
gataatagcttggggcacattatttccctggatcctgctgataaatctcctttccttgga
gatttaaaacctggttgcactcagtcatcacttgagacaaatatgtatagagcacccgta
tttcctcataaagttccattaactgactacctgctggttcgttcatcaaagggaaagcta
tcattaaggcgcattgataaaattaatgttgtcggacagcaggagcctctcatggaggta
ttatcacctggaagtaaaaatcttcagaattacatgataaacaggctattggtacacatg
tgccgtgaattccaagcagcagagaagcggcatatgcctccgtatatccgtgttgatgag
tttctctcacagtttccttaccagtcagaagcgtcattccgtaagaaaatcaaggaatat
gccaatttgcagaggggaacaaatggacagtcaattttggttaaaaagcgaaattttcgc
atttggtcagaggatgaattgagaaaaatggttacaccagagcttgtttgtgcttacgaa
agcatgcaagctggcctctaccgtctaaaacatttaggaataactgaaacacaccccact
aatatttcatctgcaatgagtcgtcttcctgatgaagcaatagcattggctgctgcatca
cacatcgagagggaactgcagattactccttggaacttgagtagcaattttgttgcttgt
acaagccagggtaaggaaaatattgaacgaatggaaattactggtgttggtgatccatct
ggtcgtggcatgggttttagctatgctcgggcacctccaaaggcaccagtgtcaagtgca
atggtgaaaaagaaagcagctgctaaccgtggaggttctactgttaccggtacagatgct
gatctacgtagattaagcatggatgctgcacgagaggttcttcttaagttcaatgttcct
gacgaagtcattgcaaaacaaactaggtggcatcgcattgctatgatacgtaaactttca
agtgagcaagcaacatctggggttaaggttgatccaacaactatcagcaaatatgctcgt
ggccagcgaatgtcctttcttcagttacagcagcagaccagagagaaatgccaggagatt
tgggatcgacaagttcaaagtctgtcagctgtaaatggtgatgaaaatgagagcgattta
gaagggaatagtgatctagattctttcgcgggagatcttgaaaatttacttgatgctgag
gagtgtgaagagggagaagagagtaccaatgacttaaaacgtgataagggagatggtgtt
aagggtcttaaaatgagaagacacccaactttggctcaggcagaggaggaaatagaagat
gacgcagctgaggctgctgaattatgcaggctgcttatggatgatgatgaagctgacaag
aagaaaaagaagaaagctaaagttattgtgggagaagctagattggtaccaaagatgcaa
tccaaattttcctttgacaatgctgaacaagttaagcaaataacaaatactttacaatta
gatggaactaatcactggaaagaggatgcaatcacagatcttagggaggaggaaaacttt
cccactaaaaaaagcaaatcactgaaggtcaataaagtcaagaagaatgatattacacct
attagtatacccaataaaaaaatcaaattgaatatgggagaaggaattaagaaccaggtg
tttaaggagaaaaaaccatcaagggaaacttttgtttgtggagcatgtggtaaggctggg
cacatgagaacgaataagaactgtccaaaatatggtgaagatctagaaactcaacttgaa
tctacagacatggaaaaatcatctggaaaatccagctttgtggatccctctagtctttcc
cagcataaagctccctccaaaaagtcaatgtctaaaggcacaacaaaaattgctcctgtt
gacaattcatcaaaaattccattgaaattcaaatgcagctccacagagaaatcttctgat
aaacctgcaatagaaagcctgcagagttctgacaagccagtcacttctgactcagaaact
gcaaagtctgctaaggttaataagataattattcccaagaaagtgaaaccagatgataca
caggctgaatctggtaagcatgctattgttatacggcctcctactgattcaggtagagga
caggttgattctcataagttccctattaaaatacgcccgccaacagaaatagatagggag
caaaaccacaaaaagattgttataaaacgtacaaaggaagttattgatctggaactggac
agtcctggtggaaacactggacttcaacacagaaaaactaaaagaattgttgaattgtcg
aatttcgagaaacaaaagaaacaggagaccgtgtatggaactgaaggttttaaaaaatgg
aacagtaaagaggacagaagatggcaggaagagcaagagaaatggagaaatgatgcaagg
cttcgagaagaagacagagcaagaaggcatcgcaaagaagaaatcaggatgctcaaagag
caagaaaggttagatgagataaaaagatttgaagaagatattagaagagaaagggaggag
gaagaacaacaaaaagctaagaagaagaagaagaagaagcctgagttaagagacgagtat
ttagatgacctcagagcaagaagacacgataagagaatgccagaaagagaccggagtgga
aaaaggagatctattactgagttaggaaagattggtgcagattatatgccgccaacaaaa
cgccgaagagggggagggggagaggttggtttggcaaatatcttggagagcgttgtggac
accattgtgaaagataggtatgatctgtcgtatcttttcttgaaaccggtgtcgaagaaa
gaggctcctgactacctggacattatagagagacctatggatctttccagaatcagggag
agagtacggaatatggagtacaagagccgagaagatttcaggcacgacatgtggcagatt
acttttaatgcacataaatataacgacgggcgaaatccgggaattcctccccttgcagat
atgcttttggaatattgtgattatttgttgaatgagaatgacgatagcctcactgaagca
gaaactggcattgaaattagagatttctaa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (35)   
   KEGG ORTHOLOGY (1)   
   RefGene (30)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (6)   
   Pfam (6)   
All databases (57)   

Download RDF
DBGET integrated database retrieval system