KEGG   Glycine max (soybean): 100788749
Entry
100788749         CDS       T01710                                 
Name
(RefSeq) serine/arginine-rich SC35-like splicing factor SCL28 isoform X1
  KO
K12900  serine/arginine-rich splicing factor 10
Organism
gmx  Glycine max (soybean)
Pathway
gmx03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gmx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100788749
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:gmx01009]
    100788749
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gmx03041]
    100788749
Protein phosphatases and associated proteins [BR:gmx01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     100788749
Spliceosome [BR:gmx03041]
 Common components
  Common spliceosomal components
   SR proteins
    100788749
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 100788749
NCBI-ProteinID: XP_014625307
UniProt: I1MRC7
Position
17:1582739..1587958
AA seq 250 aa
MGRYRSRSRSYSPRRRSRSPPAPRGRNRYVDDRYGDSRSYRDRRSPLPSGLLVRNLPLDA
RPEDLRIPFERYGPVKDVYLPKNYYTGEPRGFGFVKYRYGEDAAEAKQHLNHTIIGGREI
RIVFAEENRKTPQEMRVNTRGSGRYGGGRRRNHTRSPRRRYRSYSRSPSPARDDSRDGRG
RDDYYSPERSRSYSRSLSPSGGKDYRKSPRLRENGRSPNDKKDQTPSRSESPRGNDRSPS
RSRSRSYSPR
NT seq 753 nt   +upstreamnt  +downstreamnt
atgggaaggtatcgaagccggagcaggagctatagcccccggcggcgaagcaggagccca
ccggcaccgcgcggacggaaccgctatgtcgacgatcgctacggtgacagcaggtcttac
agagaccgccgctcacctcttccttccggcttgcttgttcgcaatcttccccttgatgcc
aggcctgaggatcttaggatcccatttgagcgctatggtcctgtgaaggatgtttatcta
cctaaaaattactacactggtgagcctcgcggctttggatttgtgaaatatcgatatggt
gaagatgcagctgaggcaaagcaacatcttaatcatactatcattggtggacgtgaaata
aggattgttttcgctgaggaaaacaggaaaactcctcaagaaatgcgtgttaacactcga
ggaagtggtcgatatggaggtggtagaaggaggaatcatactagatccccacgacgccga
tatcgttcatattctcggtctccatcaccagctagggatgattcaagggacggcaggggt
agggatgattattattctcctgagcgatcaagatcttattctaggtctctctctcccagt
ggtgggaaggactacaggaagtcccctcgtcttagggagaatggtcggagtcctaatgac
aagaaggatcagacacccagcagatccgagagtcctaggggcaatgatcgtagtccttca
aggtctcgttcacggtcatacagtccacgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (27)   

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