KEGG   Glycine max (soybean): 100810845
Entry
100810845         CDS       T01710                                 
Name
(RefSeq) TATA-box-binding protein isoform X2
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
gmx  Glycine max (soybean)
Pathway
gmx03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:gmx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    100810845
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:gmx03000]
    100810845
   03021 Transcription machinery [BR:gmx03021]
    100810845
Transcription factors [BR:gmx03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    100810845
Transcription machinery [BR:gmx03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     100810845
  RNA polymerase III system
    TFIIIB
     100810845
  RNA polymerase I system
    SL1/TIF-1B
     100810845
SSDB
Motif
Pfam: TBP DUF3378
Other DBs
NCBI-GeneID: 100810845
NCBI-ProteinID: XP_006587932
UniProt: I1L727
Position
9:complement(49627101..49631715)
AA seq 185 aa
MAEQALEGSQPVDLTKHPSGIVPTLQNIVSTVNLDCKLELKSIALQARNAEYNPKRFAAV
IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKDFKIQNIVGSCDVKFPIRLEGLAY
SHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEF
RKNQQ
NT seq 558 nt   +upstreamnt  +downstreamnt
atggctgaacaagcattggaaggtagccaacctgtggatttaacaaagcacccttctggg
attgtgcctacccttcaaaatattgtgtcaacggtcaatttggactgtaagttggagctt
aaatcaattgcacttcaagctcgaaatgcagaatacaatcccaagcgttttgctgctgtt
attatgaggatcagggaaccaaaaactactgcactcatttttgcatctggcaagatggtc
tgtactggagccaagagtgagcaacagtctaaattggcggcaaggaaggattttaagatt
cagaacattgttggctcttgtgatgtcaagttccccattcgacttgagggtcttgcctat
tcccatggtgctttctcaagttatgaaccagagctgtttccaggactaatctatcgcatg
aagcaacccaagatagtcttgcttatatttgtctctggaaaaattgttctgacaggagcc
aaggttagagatgagacttacacagcttttgagaacatatatccagtgcttactgagttc
aggaaaaaccaacaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (2)   
   Pfam (2)   
All databases (22)   

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