KEGG   Glycine max (soybean): 100815934
Entry
100815934         CDS       T01710                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
gmx  Glycine max (soybean)
Pathway
gmx03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:gmx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    100815934
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gmx03021]
    100815934
Enzymes [BR:gmx01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     100815934
Transcription machinery [BR:gmx03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     100815934
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5 CFAP77 DUF2002
Other DBs
NCBI-GeneID: 100815934
NCBI-ProteinID: XP_003523670
UniProt: K7KIE2
Position
4:complement(4964050..4969564)
AA seq 1205 aa
MGHVGSSKDGTKVGLSAAAMDIDDDDDDDDDDLGDVDLDPTNSEILEELGEDMVKYWCKK
ASMLFFDEYGLISHQINSFNHFVAIGLQNTFDSFGDLVVTPGFDPSKKGENEHFRYASVK
FGKVKLDKPMFWGGEGNAQEFKMLPRHARIQRMTYASKVKIQVKVQVYVPKKVRSDKFKT
GKEEFLDREIMKEDEREIIIGRLPVMVKSDLCWMKDAEKDDDEFDHGGYFIVKGAEKTFI
AQEQLYLKRLWVMNSPGWMIAYKSQMKRNRMVIKLVGNSRSEEVENGDMCLTVYFLSVEV
PVWVLFFALGVSSDKEIVDLIGCGNDDVRIQNILFASVRDADEKCGAFRRVRNAVQYLEK
CVKSVQFPPSESMQECLEMYVFPGISGLNRKARFLAYMVKGLLLAYTGRRKCDNRDDFRN
KRLELASELLDRELKVHVAHARKRMAKALQRDLYGDRDVRPIEHYLDASIITNGLQRAFS
TGAWSHPYKRMERISGVVANVGRTNPLQTMAELRRARQQVQYTGKVGDARYPHPSHWGKV
CFLTTPDGENCGLVKNLSVTGLVSTDVTDVTESILLKLVDCGMQELVDDTSTHLGSMDKV
LLNGDWVGVCPDSSSFVAELRSRRRRNELPHQVEIKRDQSQHEVRIYSDAGRILRPLLVV
GNLLKIKGFKSDRYSFQSLLDKGVIELIGPEEEEDCCTAWGVEYLFGKEGKRSVKYTHCE
LDMSFLLGLSCSLVPFANHDHARRVLYQSQKHSSQAIGFSTTNPNIRVDTLSHQLHYPQK
PLFRTMTSDCLGKPDHSLGQSKIPPKAEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLQR
GMFRSEHIRSYKSEIDNKESSDKKRKPEDIVNFAKLQSKIGRVDSLDDDGFPYVGANLQS
GDIIIGKCAESGADNSVKLKHTERGYVQKVVLSSNDEGKNFAVVSLRQVRSPVLGDKFSS
MHGQKGVLGFLESQENFPFTRQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGILK
QATPFSTPSVDAITEQLHRAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLHHMSEDK
VKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLYERLFTLSDSSQIHI
CSKCKKVANVILRPVSGGRKIRGPYCRHCESADDIVVAHVPYGAKLLCQELFSMGINLKF
ETQLC
NT seq 3618 nt   +upstreamnt  +downstreamnt
atgggtcacgtaggttccagcaaggacggcaccaaggtggggctgtccgctgctgcgatg
gacatcgacgacgacgacgacgacgacgacgacgacctcggcgacgtcgacctagaccct
acgaactccgaaatccttgaagaactcggcgaagacatggtgaaatactggtgcaagaaa
gcgtcgatgctgttcttcgacgagtacggtctgatcagccaccagatcaactcctttaac
cacttcgtcgccatcggcctccaaaacaccttcgactccttcggagacctagtcgtaact
cccggttttgacccctccaagaagggagaaaacgaacacttccgttacgcctccgttaag
ttcggcaaggtgaagctcgacaagcccatgttctggggcggtgaagggaatgcgcaggag
ttcaagatgcttccgagacacgcgagaatccagaggatgacctacgcttccaaagtcaaa
atccaagttaaagttcaggtgtatgttccgaagaaggttcggagtgataagttcaagact
gggaaagaggagttccttgatagagagattatgaaggaagacgagagggaaatcatcatt
gggagattgccagtcatggtcaagtctgatttgtgctggatgaaagacgcggaaaaagat
gatgatgaatttgaccatggaggttattttatcgttaagggtgcagagaagacttttatt
gcacaggagcaactgtatttaaagaggctatgggttatgaacagtccagggtggatgatt
gcctacaagtcacagatgaagagaaacaggatggttattaaactggtaggcaattccagg
agtgaagaagtggagaatggggacatgtgtcttactgtatattttttgtctgttgaggtt
cctgtgtgggtactgttttttgctctcggtgtctcatctgacaaagagattgtagatctc
attggttgtggcaatgatgatgtcagaattcagaatatcctctttgcatctgttcgtgat
gctgatgagaaatgtggagcatttcgaagagttaggaatgctgttcaatatttagaaaaa
tgtgtaaaaagtgttcaatttccaccttcggaatctatgcaggagtgccttgaaatgtat
gtctttcctggaattagtggtttaaatagaaaggcgcgcttccttgcatatatggtgaaa
ggtctcttgctggcttatactggccgcagaaaatgcgacaacagggatgattttcgaaat
aagaggcttgaattggccagtgagcttcttgaccgtgagttgaaagtgcatgttgcacat
gctcggaagcgaatggcaaaggctttgcagagagacctttatggagatagggacgtacgc
ccaattgaacattatcttgacgcgtccataattacaaatggcttgcaaagggcattttca
acaggagcgtggtcacatccgtataagaggatggaaaggatctcaggtgtggttgcaaat
gttgggcgcactaatcccttgcaaaccatggctgagttaagaagagcaaggcagcaggtc
cagtacacaggaaaagttggggatgctagatatccgcatccttctcactggggcaaggtt
tgtttcctcactaccccagatggtgaaaattgtggactagtaaaaaatttgtctgtcaca
ggattagtaagtactgatgtaactgacgtaactgaatctatactgctaaaattggtggat
tgtggaatgcaagaacttgttgatgatacttccactcatcttggcagcatggacaaagtc
ctcctaaatggtgattgggttggagtgtgtcccgattccagttcgtttgtggcagagcta
cgaagtagaagacgcagaaatgagctgcctcatcaggtggaaatcaagagagaccaatct
cagcatgaagtgcgcatatactctgatgcaggaaggattctacgtcctcttttggttgtt
ggtaatctactgaagattaaaggatttaaatcagaccgttactctttccagtctctattg
gacaaaggtgttattgagctgattggacctgaagaagaggaagactgttgtactgcctgg
ggtgttgagtatttatttggaaaagaaggaaaacgatctgtaaagtacactcactgtgaa
cttgatatgtcattcttattgggtttaagctgttcacttgtaccatttgctaatcatgac
catgcaaggagggtgctctaccagtctcagaagcactcctcacaggcaattggcttttct
acaacaaacccgaacattagagttgatactttgtctcaccagttacactatccccaaaag
cccctttttcgaacaatgacttcagattgtcttggaaaaccagaccattcactgggtcaa
agtaaaatacctccaaaggcagaattctataatgggcagaatgcaattgtggctgtcaat
gtacatctgggatacaatcaagaggattccctggtgatgaaccgtgcttcactgcagcgt
ggtatgttcaggtctgagcacataaggagttacaaatctgaaattgacaataaggaatct
tcagataagaagcgaaaacctgaagacattgtaaattttgcaaagctacaaagtaaaatt
ggccgagttgatagccttgatgatgatggctttccatatgttggcgctaatctccaaagc
ggtgatattattattgggaagtgtgctgaatccggtgcagacaatagtgtaaagttaaag
cacactgaaaggggttatgtgcaaaaggttgtgctgtcttcaaatgacgagggtaaaaat
tttgctgtggtttcattaagacaggttcgtagtccagttcttggagacaagttctccagt
atgcatggtcaaaagggagttttgggatttctggagtctcaggaaaattttcctttcaca
agacaaggcattgttcctgatattgtcataaatccgcatgcatttccctcacgacaaact
cctgggcaactcctagaggctgctttaggaaaggggattgcttgtggtggtatactgaaa
caagctacgcctttctccactccttctgttgatgccattactgaacagcttcacagagct
gggttttcaagatggggaaatgagagggtatacaatggaaggactggtgagatggttcga
tcactcatttttatgggaccaacattttaccaacgtctgcaccatatgtctgaagacaaa
gtgaaattccggaacactggtccagttcacccgttgacccgacagcctgtagctgacaga
aaacgatttggaggtatcaagttcggtgagatggagcgtgattgcctaatagctcatggt
gcatcagccaacctgtatgaacgcctgtttacactcagtgactcctctcagattcacatc
tgcagcaaatgcaaaaaagttgcaaatgtgatcttgcggccagtgtctggtggacggaaa
atacgaggaccttattgccgtcactgtgaatctgcggatgacattgtggtggcccatgtc
ccgtatggggcaaagttattatgccaggagctctttagcatgggcataaatcttaaattt
gaaacccaactttgttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (42)   

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