KEGG   GENOME: Escherichia coli O25b K100 H4-ST131 EC958 (UPEC)
Entry
T04373            Complete  Genome                                 
Org code
ecos
Name
Escherichia coli O25b:K100:H4-ST131 EC958 (UPEC)
Annotation
yes
Taxonomy
TAX:941322
  Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Brite
KEGG organisms [BR:br08601]
KEGG organisms in the NCBI taxonomy [BR:br08610]
KEGG organisms in taxonomic ranks [BR:br08611]
Data source
GenBank (Assembly: GCA_000285655.3 Complete Genome)
BioProject: 61443
Keywords
Human pathogen
Disease
H00279  Uropathogenic Escherichia coli (UPEC) infection
Comment
Isolated from the urine of a patient presenting with a urinary tract infection in the Northwest region of England.
Chromosome
Circular
  Sequence
GB:HG941718
  Length
5109767
Plasmid
pEC958; Circular
  Sequence
GB:HG941719
  Length
135602
Plasmid
pEC958B; Circular
  Sequence
GB:HG941720
  Length
4080
Statistics
Number of nucleotides:       5249449
Number of protein genes:        5100
Number of RNA genes:             116
Created
2016
Reference
PMID:25126841
  Authors
Forde BM, Ben Zakour NL, Stanton-Cook M, Phan MD, Totsika M, Peters KM, Chan KG, Schembri MA, Upton M, Beatson SA
  Title
The complete genome sequence of Escherichia coli EC958: a high quality reference sequence for the globally disseminated multidrug resistant E. coli O25b:H4-ST131 clone.
  Journal
PLoS One 9:e104400 (2014)
DOI:10.1371/journal.pone.0104400

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Ontology (39)   
   KEGG BRITE (39)   
Pathway (330)   
   KEGG PATHWAY (129)   
   KEGG MODULE (201)   
Disease (1)   
   KEGG DISEASE (1)   
Genome (3)   
   ASSEMBLY (1)   
   Virus-HostDB (2)   
Gene (6311)   
   KEGG GENES (5249)   
   KEGG MGENES (958)   
   RefGene (104)   
DNA sequence (3)   
   GenBank (3)   
Literature (1)   
   PubMed (1)   
Taxonomy (1)   
   TAX (1)   
All databases (6689)   

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