KEGG   Glaciecola nitratireducens: GNIT_3420
Entry
GNIT_3420         CDS       T01632                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC, A subunit
  KO
K03701  excinuclease ABC subunit A
Organism
gni  Glaciecola nitratireducens
Pathway
gni03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:gni00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    GNIT_3420 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gni03400]
    GNIT_3420 (uvrA)
DNA repair and recombination proteins [BR:gni03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     GNIT_3420 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      GNIT_3420 (uvrA)
SSDB
Motif
Pfam: ABC_tran UvrA_DNA-bind AAA_21 nSTAND1 AAA_29 DnaJ_CXXCXGXG AAA_16 RsgA_GTPase SLFN-g3_helicase
Other DBs
NCBI-ProteinID: AEP31514
UniProt: G4QN95
Position
complement(3841603..3844161)
AA seq 852 aa
MSTVTGEPTIVEKKTNSVLCDAENCIQVRGARVHNLKNIDIDLPRNALVVFTGISGSGKS
SLAFGTLFAESQRRYLDSVSPFARRLIDQVEEPDVDSIEGLPPAVAMQQQRGAPSVRSSV
GSVTTISNGLRMLYSRAGEYPQGQGILYADSFSPNTPDGACPKCHGIGRVFEVTEKMLVP
DATKTIREGAIAAWPPAWQGKNLSRILVSLGHDIDVPWKLLPKKTRDWILFTEETPTVPV
FPEYDSARTLEAIENGEEPRYMGTFASAKHFILNSFATTQSQRTKKRVSQFMQISECPDC
EGKKLKQASLQVKFAGLDIGELSRLTLSELAERLREAESKAHTADGLHSSHKEKNIVAQR
ITRDILARVDALTTLGLGYLSLERGTPTLSGGELQRLRLATQIRSKLFGVVYVLDEPSAG
LHPADTQALLGALDELIRAGNSLFVVEHDVSVIQHADWIVDIGPNAGSHGGEVVYNGPIE
GLRDVTESHTRSHIFAATASAKKAQRAPAAWLKLAGVERNNLQGLNVDFPLGVMSTVTGV
SGSGKSSLVSQALVELVYDALGQKKTVDEPNGEADLLERELDTSTRGQIVAGMEHVKRLV
SVDQKPIGRTPRSNLATYTGLFDHVRKLFASTRESKARRYDAGRFSFNVAKGRCSNCDGV
GFVSVELLFLPSVYSPCSVCQGQRYNDKTLEISYRDKNIAEVLDLTVESARAFFESEPLV
ARALDALLQVGLGYLRLGQPATELSGGEAQRIKLATELQRSQRGDTLYVLDEPTTGLHPA
DVSMLMLQLNGLVDAGNTVIMVEHDMQVASNSDWVIDIGPGAGDEGGLVVAQGSPAHVAR
SKSSRTAPFMLP
NT seq 2559 nt   +upstreamnt  +downstreamnt
atgtctactgttacgggagaaccaaccatcgtcgaaaagaaaactaatagcgtcctctgc
gatgctgaaaactgcattcaagtgcgcggagcgcgcgtacacaacttaaagaatatcgac
atagatttacctcgcaacgcactcgtcgttttcaccggcatttccggctctggaaaatcg
tcactcgcttttggaacattatttgccgaatcacagcggcgctatcttgattcagtctct
ccttttgcgcgccgactcattgatcaagtagaagaacctgacgttgattcgatcgaaggc
ttgccgccagcggtcgcaatgcagcaacaaagaggcgcgccttcggttcgttcatctgta
ggcagtgtcaccacaatttcaaatgggctgcgcatgctttactcccgcgccggagagtat
ccgcaaggacaaggaatactttacgccgattccttttctccgaatacaccagacggtgct
tgtcctaaatgccatggaatagggcgagtttttgaagtgaccgaaaagatgcttgtgcct
gatgcgacaaaaacaattcgtgagggcgctattgctgcttggccgcccgcgtggcagggt
aaaaaccttagccgtatactggtttcactggggcacgacattgatgtgccgtggaaactg
ttaccgaagaaaacgcgagactggatcttgtttacggaagaaaccccgaccgtgccggtt
ttccccgaatacgactccgcacgcacgcttgaagctatcgaaaatggcgaagagccgcgt
tacatgggcacatttgcgagcgcaaagcacttcatcctcaattcattcgctactactcaa
agtcaaagaaccaaaaagcgtgtttctcaatttatgcaaatatctgaatgtccagactgt
gaagggaagaaactcaagcaagcgtctttgcaggtgaagtttgctgggctcgacattgga
gaactgtcgcgcttaacgcttagtgagcttgctgagcggctgcgtgaagccgaaagtaaa
gctcatacggcggatgggttgcatagctcgcataaagaaaaaaacatcgttgcacaacga
attacgcgtgatattttggcgcgtgttgatgcactcacaacgcttggcttaggttatctg
tcgttagagcgaggcactcccaccttatctggcggtgaactgcagcgtctgcgcctagca
actcaaattcgctcaaagctgtttggcgttgtttatgtactagacgaaccgtctgcaggt
ttgcaccccgccgacactcaggccttattaggcgcattagatgaactgatacgcgctggc
aattcattatttgtggttgaacatgacgtaagcgttattcaacacgcagactggatagta
gacattggccctaatgcgggcagccatggtggtgaagttgtctacaatggtccgatagag
ggcttgcgtgacgttaccgaatcgcatactaggagccacattttcgcagccacggctagc
gccaaaaaggcacagcgagcgcctgcagcttggttgaagttagcgggagtagaacgcaat
aatcttcaggggctgaacgttgattttccactcggtgtgatgtcgacggttaccggcgta
tcgggttctggcaaatctagtcttgtgagtcaggcactggttgaactggtttacgatgcg
cttggccaaaaaaagacggtcgatgagcctaatggtgaggcggacttactcgagcgggag
ttagacacttcaactcgcggacaaattgttgcgggaatggagcatgtgaagcgcttagtt
agtgttgatcagaagccaattggccgcactccgcgctctaatcttgccacatataccggc
ttgtttgatcacgtgcgtaagctgtttgcttcaacgcgtgaatcaaaagcgcgacgctat
gatgctgggcgcttctcgtttaacgtagcaaaggggcgctgttcgaattgtgacggggtt
ggatttgttagtgtcgagctactgtttctgccaagcgtttattcaccatgttccgtgtgc
caagggcagcgttacaacgacaagacgctggagataagctatcgcgacaagaatatcgcc
gaagtgttagatttaaccgtagagtctgcgcgcgcattctttgaaagtgaacctttagtg
gcgcgtgcattggatgccttgcttcaggttggtctcggctatttgagactcggccagcct
gccacagagttatcaggcggtgaggctcagcgcatcaaacttgcaacagaattacagagg
tcacagcgcggtgatacgctttatgtgctcgatgagccaacgactggcttgcacccagcc
gatgtctcgatgttaatgctgcaattgaatgggctggttgacgcaggtaataccgtcatc
atggtcgagcatgatatgcaggttgctagcaacagcgattgggttattgacatcggtccc
ggcgctggcgatgaaggtggattagttgtcgcgcaggggtcacctgcgcacgttgcaagg
tcgaagagcagtcgaacggctccgttcatgctgccttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system