KEGG   Gordonia sp. YC-JH1: CXX93_00850
Entry
CXX93_00850       CDS       T05256                                 
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
goc  Gordonia sp. YC-JH1
Pathway
goc03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:goc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CXX93_00850
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:goc03400]
    CXX93_00850
Enzymes [BR:goc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     CXX93_00850
DNA repair and recombination proteins [BR:goc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     CXX93_00850
SSDB
Motif
Pfam: Exo_endo_phos
Other DBs
NCBI-ProteinID: AUH67181
Position
complement(167358..168233)
AA seq 291 aa
MASEELTVVSFNVNGIRAARRRGFDTWLADRAPDVVGLQELRCPPEEIGEFPGYTVSFDT
GTIPGRNGVAIATRQPPASVRSWATDPPRARGLSAHASHGRYLEVDLADEPITVACLYLP
KGGLPAELQRPGNIREKPDGGAKYRRKMAFLAGFARELERNRLAARRAGREFLLIGDLNI
AHCEHDVTNWRAARKMEGFLPEEREWLDRQLSPRRLIDVVRTLYGDRPGPLTWWSWAGQS
FVKDVGWRIDHQLASPGLASRARWVTVDKEPSPDERLSDHAPLVVGYRRRA
NT seq 876 nt   +upstreamnt  +downstreamnt
gtggcatccgaggaactgaccgtggtctcgttcaacgtcaacggcatccgtgcggcgcga
cgccgcggcttcgacacgtggctggcagatcgggcaccggatgtggtgggactgcaggag
ctccgctgcccgcccgaggagatcggcgaattccccggctacacggtgtctttcgacacg
gggaccattccggggcgcaacggcgtggcgatcgcgacccggcagccgccggcgtcggtg
cggagctgggccaccgacccgccgcgggcccgcgggctgtccgcgcacgcctcgcacgga
cgctatctggaagtcgacctcgccgatgagccgatcacggtggcctgtctgtacttgccg
aagggcggcttgcccgcggaactgcagcgtcccgggaacatccgggagaagcccgacggc
ggtgcgaagtaccggcgcaagatggcgttcctggccggcttcgcgcgcgaactggagcgc
aaccgactcgccgctcgccgcgccggtcgggagttcctgctgatcggcgacctgaacatc
gcccactgcgagcacgacgtcaccaactggcgcgccgcacgcaagatggaggggtttctg
ccggaggagcgcgagtggctcgatcggcagctctcgccgcgcaggctgatcgacgtggtc
cggacactgtacggcgaccggcccggcccgctcacctggtggagctgggccgggcagtcg
ttcgtgaaggacgtcggatggcgcatcgaccaccaactcgcgtcaccggggctggcgtcc
cgggcgcgatgggtgacggtcgacaaggagccctcgccggatgagcgtctgtcggatcac
gcgccgctggtggtcgggtaccggcggcgggcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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