KEGG   Gordonia sp. YC-JH1: CXX93_02965
Entry
CXX93_02965       CDS       T05256                                 
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
goc  Gordonia sp. YC-JH1
Brite
KEGG Orthology (KO) [BR:goc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:goc03032]
    CXX93_02965 (gyrB)
   03400 DNA repair and recombination proteins [BR:goc03400]
    CXX93_02965 (gyrB)
Enzymes [BR:goc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     CXX93_02965 (gyrB)
DNA replication proteins [BR:goc03032]
 Prokaryotic type
  DNA Topoisomerases
   CXX93_02965 (gyrB)
DNA repair and recombination proteins [BR:goc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      CXX93_02965 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c Trep_dent_lipo HATPase_c_3
Other DBs
NCBI-ProteinID: AUH67498
Position
complement(633401..635455)
AA seq 684 aa
MADTSGNAPKKSGKSKPSEYGADSISILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDN
SVDEAMAGYATRVDVTLLADGGIRVVDDGRGMPVGMHATGVPAVEVIMTQLHAGGKFDSD
SYAVSGGLHGVGISVVNALSTKVELEIKRNGSVWRQTYTNAEPGPLVEGEAASGTGTSVS
FWADGKIFETTEYNIETIARRLQEMAFLNKGLTITLTDERVHEAVLEAEVEESEDGDASI
KTEEQKATAIAKVKTRTYHYPDGLIDYIKHLNSRTKAPIHKTVVGFTAKGEGHEVEIAMQ
WNEGYAESVHTFANTINTAEGGTHEEGFRAALTSTVNRYAIDKKLIKEKDGKLSGDDIRE
GLAAVISVKVADPQFEGQTKTKLGNTEVKSFVQKTCNEHLAMWFDANPAEAKTIIRKAAD
SQQARLAARRARELVRRKTATDIGGLPGKLADCRSNDPSKCEVYIVEGDSAGGSAKSGRD
SMYQAILPLRGKIINVEKARIDRVLKNAEVQSIITAFGTGIHDEFDISKLRYHKIVLMAD
ADVDGQHIATLLLTLLFRFMRPLIEQGHVFLAMPPLYKLKWQKGAEPEFAYNDRERDALL
EAGRAAGKKINPDDGIQRYKGLGEMNASELWETTMDPEVRVLKQVTLDDAAAADELFSIL
MGEDVVARRTFIARNAKDVRFLDV
NT seq 2055 nt   +upstreamnt  +downstreamnt
gtggcagacaccagcggcaacgcacctaagaagtcaggcaagtcaaagccgagcgaatac
ggtgccgactcgatcagcatcctcgagggtctggaagctgtccgcaagcgtcccggcatg
tacatcggttccaccggtgagcgcggtctgcaccacctgatctgggaagtcgtcgacaac
tcggtcgacgaggcgatggccggctacgccacccgcgtcgacgtgaccctgctggccgac
ggcggcatccgcgtcgtggacgacggtcgtggcatgcccgtcggcatgcatgcgacgggt
gtgcccgcggtggaggtcatcatgacccagctgcacgccggcggtaagttcgactccgat
tcatacgcggtgtcgggcggtctgcacggcgtcggcatctcggtggtcaacgcgctctcc
accaaggtcgagctggagatcaagcgcaacggttcggtgtggcggcagacgtacaccaac
gccgagccgggtccgctcgtcgagggcgaggccgcgtccggcaccgggaccagcgtctcc
ttctgggccgacgggaagatcttcgagaccaccgagtacaacatcgagacgatcgcccgg
cggctccaggagatggccttcctgaacaagggcctcaccatcaccctgaccgacgagcgg
gtccacgaggccgtgctcgaggcagaggtggaggagtcggaggacggcgacgccagcatc
aagaccgaagagcagaaggctacggccatcgccaaggtcaagacgcggacgtaccactac
ccggacggcctcatcgactacatcaagcacctcaacagccgcaccaaggccccgatccac
aagaccgtcgtcggcttcaccgccaagggtgagggccacgaggtcgagatcgcgatgcag
tggaacgagggatacgcggagtcggtccacaccttcgccaacaccatcaacaccgctgag
ggcggtactcacgaagagggcttccgcgcggcgctgaccagcacggtcaatcgctatgcg
atcgacaagaagctcatcaaggagaaggacggcaagctctccggcgacgacatccgagag
ggtctggccgccgtcatctccgtcaaggtggccgacccgcagttcgagggccagaccaag
accaagctcggtaacaccgaggtcaagagcttcgtccagaagacgtgcaacgagcacctg
gcgatgtggttcgacgcgaacccggccgaggccaagaccatcatccgcaaggccgcggat
tcgcagcaggcccgactcgcggcgcgtcgcgcacgtgagctcgtccgccgcaagaccgcg
accgacatcggcggcctgcccggcaagctcgccgactgccgcagcaacgaccccagcaag
tgcgaggtctacatcgtggagggcgactccgcgggcggttccgccaagtcgggccgcgac
tcgatgtaccaggcgatcctgccgctgcgaggcaagatcatcaacgtcgagaaggcccgc
atcgaccgcgttctcaagaacgccgaagtccagtcgatcatcaccgccttcggcaccggc
atccacgatgagttcgacatcagcaagctgcgctatcacaagatcgtgctgatggccgac
gccgacgtcgacggtcagcacatcgcgacgctgctgctcacgctgctgttccgcttcatg
cggccgttgatcgaacagggacacgtcttcctcgcgatgcccccgctgtacaagctcaag
tggcagaagggcgccgagccggagttcgcgtacaacgaccgcgagcgcgacgcgctgctc
gaggccggccgcgccgcgggcaagaagatcaacccggacgacggcatccagcgttacaag
ggtctgggcgagatgaacgccagcgagctgtgggagaccacgatggatccggaggtccgc
gtcctcaagcaggtcaccctcgacgacgccgctgccgccgacgaactgttctcgatcctc
atgggcgaggacgtggtggcacgccgcaccttcatcgcgcgcaacgccaaggacgttcgc
ttcctcgacgtctga

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