KEGG   Gordonia sp. YC-JH1: CXX93_03940
Entry
CXX93_03940       CDS       T05256                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
goc  Gordonia sp. YC-JH1
Pathway
goc03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:goc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    CXX93_03940
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:goc03400]
    CXX93_03940
DNA repair and recombination proteins [BR:goc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     CXX93_03940
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: AUH67649
Position
848644..849504
AA seq 286 aa
MRSIWRGDLSFGLVNVPVKVYSATESHDRSSHQVDSADGARIRYRRVREGTDTEVEFSKI
ANAYESESGEQVVLTKEDLATLPVNKSPEISILEFVPIDQVDPIYFDKPYYLEPASKSPK
AYVLLAKALETTERLAIANFTLRNRTRLAALRVIDGVMTLQTLLWPDEVRVPDFDFLNAD
VEIRDQELDMASSLIETMASDFDPSQFEDTYQVELGKLIEARADGGQAFSETEEEAPDDD
SEVADLLAALRASVKSRGREVEDEKPPAKKAAKKAPAKKAAKKKSA
NT seq 861 nt   +upstreamnt  +downstreamnt
atgcgctcgatctggagaggtgatctgagctttggtctggtgaacgtgccggtcaaggtg
tactccgccacggagagccacgaccgcagttcgcatcaggtcgattccgccgacggggcc
cggatccggtatcggcgggtgcgcgagggcaccgataccgaggtcgagttctccaagatc
gccaacgcctacgagtccgagagcggcgagcaggtggtgctgaccaaggaagacctcgcg
accctgccggtcaacaagagcccggagatctcgatcctcgagttcgtgccgatcgaccag
gtggacccgatctacttcgacaagccgtactacctggagccggcgtccaagtcgccgaag
gcgtatgtgctgctcgcgaaggcgctggagaccaccgagcgtctcgccattgcgaatttc
acgctccggaaccggacacggctggcagcgctgcgggtcatcgacggcgtgatgaccctg
cagacgctgctgtggccggacgaggtccgggtaccggacttcgacttcctgaacgccgac
gtcgagatccgcgatcaggaactggacatggcgtcgtcgctcatcgagacgatggcctcg
gacttcgaccccagccagttcgaggacacctatcaggtggagctcggaaagctcatcgag
gcgcgagccgacggtggccaggcattctcggagaccgaagaggaagcgcccgacgacgac
tcggaggtcgcggaccttctcgcggcgctgcgggcgtcggtcaagagccgcggccgggag
gtcgaggacgagaaaccgcccgcgaagaaggcggcgaagaaggctccggccaagaaggcc
gccaagaagaagtcggcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (8)   

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