KEGG   Gordonia sp. 135: GKZ92_05140
Entry
GKZ92_05140       CDS       T06305                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
god  Gordonia sp. 135
Pathway
god03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:god00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    GKZ92_05140
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:god03021]
    GKZ92_05140
   03400 DNA repair and recombination proteins [BR:god03400]
    GKZ92_05140
Enzymes [BR:god01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     GKZ92_05140
Transcription machinery [BR:god03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     GKZ92_05140
DNA repair and recombination proteins [BR:god03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      GKZ92_05140
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 DUF3450 Sey1_3HB
Other DBs
NCBI-ProteinID: QGP87093
UniProt: A0A6I5ZCH0
Position
1122653..1126609
AA seq 1318 aa
MLDVNFFDELKIGLATADDIHNWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTKAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVITAVDDELRHNELSTLEAEMEVEKKAVADQRDADLNERQQKLEQD
LAELEAEGAKADVRRKVRDGAEREMRRMRDSAQRELDGLEEIWDKFVKLAPGDLIIDEKL
YRQLEERYGEYFQGSMGAEAIKKLLETFDIDAEAESLRETIRSGKGQKKLRALKRLKVVA
AFQQSGNSPLGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKLMALELFKPFVMKRLVDLNQAQNIKSAKRMVERQR
PAVWDVLEEVISEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILSPASGRPLAMPRLDMVTGLYYLTSLKEGAEGEYT
PATADDIERGVYSSPAEAIMAVDRGQLTVQSRIRVRLTGQRPPAEVEAELFPEGWRFGQP
WTTITTLGRVLFNELLPIEYPFVDEQMPKKRQAAIINDLAERYPMIVVAQTVDKLKDVGF
YWATRSGVTVSMADVLVPPQKAEILDRYEERADGLERKFQRGALTPDERRDALVEIWKQA
TEEVGKAMEEYYPEDNPIIMIPKSGATGNLTQVRNLSGMKGLVTNPKGEFIPRPIKSSFR
EGLTVAEYFINTHGARKGLADTALRTADSGYLTRRLVDVSQDVIVRETDCGTERGINVPL
GEKQPDGSIIRDAHVETSAYARTLAADAVDADGNVVVERGHDLGDPAIEALLAAGIAQVK
VRSVLTCATGTGVCAHCYGRSMATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHQGGVG
DDITGGLPRVQELFEARVPKGVAPIAEVSGRIRLEDDDRFYKITIIPDDGSEEVVIDKIS
KRQRLRVFKHDDGTERLLADGDHVEVGQQLMEGSANPHEVLRVMGPRQVQIHLVNEVQEV
YRSQGVSIHDKHIETIVRQMLRRVTIIDHGATEFLPGSLVERAEFEAANRQVVTEGGEPA
AGRPVLMGITKASLATESWLSAASFQETTRVLTDAAINSRSDKLIGLKENVIIGKLIPAG
TGINRYRNIQVQPTEEARAAAYAVPSYDDTYYSPDGTFGAPAGAAVPLDDYGFSNEYR
NT seq 3957 nt   +upstreamnt  +downstreamnt
gtgctcgacgtcaactttttcgacgaactgaagatcggcctggccacggccgacgacatc
cacaactggtcatacggtgaggtcaagaagccggagacgatcaactaccgcacgctcaag
cccgagaaggacggcctgttctgcgagaagatcttcggaccgacccgcgactgggagtgc
tactgcggtaagtacaagcgcgtccgcttcaagggcatcatctgcgagcgctgcggcgtc
gaggtgaccaaggccaaggtgcgccgtgagcgcatgggccacatcgaactggccgcaccg
gtcacgcacatctggtacttcaagggtgtgccgagccggctgggctacctgctcgacctg
gcgccgaaggatctcgagaagatcatctacttcgccgcctacgtgatcaccgccgtcgac
gacgaactgcgtcacaacgagctctcgaccctcgaggccgagatggaggtcgagaagaag
gccgtcgccgatcagcgcgacgccgacctgaacgagcgtcagcagaagctcgagcaggat
ctcgccgagctcgaggccgagggtgccaaggccgacgtgcgccgcaaggtgcgcgacggt
gccgagcgcgagatgcgtcgtatgcgcgactccgctcagcgtgagctcgacggtctcgag
gagatctgggacaagttcgtcaagctcgccccgggcgacctcatcatcgacgagaagctg
taccgccagctcgaagagcgctacggcgagtacttccagggttcgatgggtgccgaggcg
atcaagaagctcctcgagaccttcgacatcgacgccgaggccgagtcgctgcgcgagacc
atccgcagcggcaagggccagaagaagctccgtgctctcaagcgcctgaaggtcgtcgcc
gcgttccagcagtcgggcaactcgccgctgggcatggtcctcgacgccgtgccggtgatc
ccgccggagctgcgtccgatggttcagctcgacggtggccgcttcgcgacctccgacctg
aacgacctgtaccgccgcgtcatcaaccgcaacaaccgcctcaagcgtctgatcgacctc
ggtgcccccgagatcatcgtgaacaacgagaagcggatgctgcaggagtcggtcgacgcc
ctgttcgacaacggccgtcgtggccgtccggtcaccggcccgggcaaccgcccgctgaag
tccctgagcgatctgctcaagggcaagcagggtcgtttccgtcagaacctcctcggcaag
cgcgtcgactactcgggccgttcggtcatcgtcgtcggcccgcagctgaagctgcaccag
tgtggtctgccgaagctgatggctctcgagctgttcaagccgttcgtgatgaagcgtctg
gtcgacctgaaccaggcccagaacatcaagtcggccaagcgcatggtcgagcgtcagcgc
cccgcggtgtgggacgtcctcgaagaggtcatctccgagcacccggttctgctgaaccgt
gcacccacgctgcaccgcctcggcatccaggccttcgagccgcagctggtggagggcaag
gccatccagctgcacccgctcgtgtgtgaggccttcaatgccgacttcgacggtgaccag
atggccgtgcacctcccgctgtccgcggaggcgcaggccgaggcacgcatcctgatgctg
tcgtcgaacaacatcctgtcgccggcatcgggccgcccgctcgccatgccgcgtctggac
atggtgaccggtctgtactacctgacctccctcaaggagggtgcggaaggcgagtacacc
ccggcgaccgccgacgacatcgaacgcggtgtctactcgagcccggccgaggccatcatg
gccgtcgaccgcggtcagctcaccgtccagtcgcgcatcagggtgcgtctgaccggtcag
cgtccgccggccgaggtcgaggccgagctgttccccgaaggatggcgtttcggtcagccg
tggaccaccatcaccacgctgggccgcgtgctcttcaacgagctgctgccgatcgagtac
ccgttcgtcgacgagcagatgccgaagaagcgtcaggccgcgatcatcaacgatctcgcc
gagcgctacccgatgatcgtggtcgcccagaccgtcgacaagctcaaggacgtcggcttc
tactgggccacccgttcgggcgtcaccgtgtcgatggccgacgtgctcgtgccgccgcag
aaggcggagatcctcgaccgttacgaggagcgcgccgacggcctggagcgcaagttccag
cgcggtgccctcacgccggacgagcgtcgcgacgcactggtggagatctggaagcaggcc
accgaagaagtcggtaaggccatggaggagtactaccccgaagacaacccgatcatcatg
atcccgaagtcgggtgccaccggtaacctgacgcaggttcgtaacctgtcgggcatgaag
ggtctggtgaccaacccgaagggtgagttcatcccgcgtccgatcaagtcctcgttccgc
gagggcctgaccgtcgccgagtacttcatcaacacgcacggtgcccgtaagggtctggcg
gacacggctctccgtaccgccgactcgggttacctgacccgtcgtctggtcgacgtgtcg
caggacgtcatcgttcgcgagaccgactgtggcaccgagcgcggcatcaacgtgccgctg
ggtgagaagcagccggacggctcgatcatccgcgacgcgcatgtcgagacctcggcgtac
gcacgcaccctggccgccgacgcggtcgacgccgacggcaacgtcgtcgtcgagcgcggc
cacgatctcggcgacccggccatcgaggctctcctcgcggccggcatcgcccaggtcaag
gtccggtcggtcctcacctgtgccaccggcaccggtgtgtgtgcgcactgctacggccgt
tcgatggccaccggcaagctcgtcgacatcggtgaggccgtcggtatcatcgcggcccag
tcgatcggtgagcccggtacccagctgacgatgcgtacgttccaccagggtggcgtcggt
gacgacatcaccggtggtctgcctcgtgtccaggagctcttcgaggcccgcgtccccaag
ggcgtcgcgccgatcgcggaggtctcgggccggattcgcctcgaggacgacgaccgcttc
tacaagatcacgatcatcccggacgacggttccgaagaggtcgtcatcgacaagatctcg
aagcgtcagcgtctgcgcgtgttcaagcacgacgacggaaccgagcggctcctcgccgac
ggtgaccacgtcgaggtcggccagcagctcatggagggctcggccaacccgcacgaggtc
ctgcgtgtcatgggtccccgtcaggtgcagatccacctggtcaacgaggtccaggaggtc
taccgcagccagggtgtgtcgatccacgacaagcacatcgagacgatcgttcgtcagatg
ctgcgtcgcgtgacgatcatcgatcacggtgcgaccgagttcctgcccggttcgctcgtc
gagcgtgccgagttcgaggcggccaaccgtcaggtggtcaccgagggtggcgagcccgca
gccggacgtccggtgctcatgggtatcaccaaggcctcgctcgcgaccgagtcgtggctg
tcggcggcgtcgttccaggagaccacgcgtgtcctgaccgacgcggcgatcaacagccgc
agcgacaagctgatcggtctgaaggagaacgtgatcatcggtaagctgatcccggccggt
accggtatcaaccgttaccgcaacatccaggttcagcccaccgaagaggcacgtgccgcg
gcctacgcggtgccgtcctacgacgacacctactacagcccggacggcaccttcggtgct
ccggccggcgctgcggtgccgctggacgactacggtttctccaacgaataccggtaa

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