KEGG   Gordonia sp. 135: GKZ92_06385
Entry
GKZ92_06385       CDS       T06305                                 
Name
(GenBank) Fpg/Nei family DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
god  Gordonia sp. 135
Pathway
god03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:god00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    GKZ92_06385
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:god03400]
    GKZ92_06385
Enzymes [BR:god01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     GKZ92_06385
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     GKZ92_06385
DNA repair and recombination proteins [BR:god03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     GKZ92_06385
SSDB
Motif
Pfam: H2TH Fapy_DNA_glyco zf-FPG_IleRS NFACT_N zf-TFIIB TMEM106_N OrfB_Zn_ribbon
Other DBs
NCBI-ProteinID: QGP87302
UniProt: A0A6I5ZAT8
Position
1392202..1393107
AA seq 301 aa
MPELPEVAAIADYVDGRAAGLPIRRVDVASLSVLKTADPPYTALTGRIVESVGRVGKYLV
IRTIPGQNQDNPPATASEPELSLVIHLSRAGWVRWSEDLSPKPLRPGGKSPIALRVHCGL
PGEGFDVTEAGTQKRLAVWLVRDLAEIDRVAGLGPDALELTEEHFAEILAGTTGRVKNVL
TDQHTIAGIGNAYSDEILHTARLSPFASSKTLKPDQVSALYDAMRAVLTDATGRLEGQTV
ARLKSEKRTGLRVHARTGLPCPVCGDTVREVSFADRSFQYCPTCQTGGKVLADRRMSRLL
K
NT seq 906 nt   +upstreamnt  +downstreamnt
atgcccgagctccctgaggtggccgccatcgccgactatgtcgacggtcgcgcggccgga
ctcccgatccggcgagtcgacgtcgcgtccttgtccgtgctcaagacggccgacccgccg
tacaccgcgctcaccggccggatcgtcgaatcggtcggccgggtgggcaaatacctggtc
atccggaccatccccggccagaaccaggacaatccgccggcgaccgcatccgaacccgag
ctgtcgctggtcatccacctgtcgagggccggctgggtgcggtggagcgaggacctctca
cccaagccgctacgcccgggcggcaagtcgccgatcgcgctgcgggtgcactgcgggcta
cctggcgagggcttcgacgtcaccgaggccggaacccagaagcggctggcggtgtggctc
gtccgcgacctcgccgagatcgaccgcgtcgccgggctcggccccgacgccctggaactg
accgaggaacatttcgccgagatcctcgccggtaccaccggacgtgtgaagaacgtgctc
accgaccagcacaccatcgccgggatcggcaacgcctactccgacgagatcctgcacacc
gcgcgactgtcgccgttcgcatcgtcgaagaccctgaaacccgatcaggtgagcgccctg
tacgacgcgatgcgcgccgtgctcaccgacgccacggggcgtctcgaagggcagaccgtc
gcccggttgaagtcggagaaacgcaccggactccgcgtgcacgcgcgcaccggactgccg
tgtccggtctgcggcgacaccgtccgcgaggtgtccttcgccgaccggtccttccagtac
tgcccaacctgccagaccggtggcaaggtcctcgccgaccgccggatgtcgcggcttctg
aaatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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