KEGG   Gordonia sp. 135: GKZ92_08545
Entry
GKZ92_08545       CDS       T06305                                 
Name
(GenBank) HsdR family type I site-specific deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
god  Gordonia sp. 135
Brite
KEGG Orthology (KO) [BR:god00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:god02048]
    GKZ92_08545
Enzymes [BR:god01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     GKZ92_08545
Prokaryotic defense system [BR:god02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   GKZ92_08545
SSDB
Motif
Pfam: T1RH-like_C SWI2_SNF2 HSDR_N ResIII DEAD AAA_22
Other DBs
NCBI-ProteinID: QGP87685
UniProt: A0A6I5ZA27
Position
complement(1864134..1867340)
AA seq 1068 aa
MSAIPEAEWENLALEWLADQEWQPLKGSDIAPGVENGRTRWDDIVLPDRLLAKVRELNPG
VPYEYLVQARAAILAPESQDPLAENHRLHEILVKGYRGITYVDHDGLEQTPTILLVGNRP
EDNELLAVQQVTVRNSEHQRRCDVVLYLNGLPVAFFELKQAGAAQADLASAHAQLGTYLR
EFPLVFRFAVVSVVSDVLSARYGTPFTPLEHYAPWNVDDDGKPLSMGHPTDPAQLGLELE
YLIDGVFNPERFLQILRNFTAFDAGADGYVKRIAKPHQYFAVTKAVGNTVAAAESNGKAG
VVWHTQGSGKSMEMELYAHLVARQPKLKNPTIVVVTDRRELDGQLFETFNRSELLDESPV
KVTTREQLRDELSNRTTGGIYFTTLQKFSRTQAERDAGADHPLLTDRRNVIVVVDEAHRS
HYDDLDGYARHLADAVPNATLIAFTGTPISFAERNTREVFGPYIDIYDLTRAVDDGATVP
VYFEPRLIQVTLADEVTEDDLDRAADEATKGLDDAERAQIEKSVAVINAVYGAPERVKAL
AKDIVEHWDGRSKSLETFISTPGKAFIVAATRDIAARLYEEIVALRPGWHDEAVDKGVIK
VVYSGSAKDQGLIAKHVRRDAQNKIIQKRLKDPDDELQIVIVKDMMLTGFDAPPLHTLYL
DRPLKGALLMQTLARVNRTFRGKPSGLLVAYAPLVDNLQQALAEYTETDQASQPVGRNID
EAVALTQQLISQLDDLCSGYDWRTKAKEADRGWIRAAIGLTEYLRSPETPGNSVPEGEET
LGGRFRTLAAHLAKAWALAGGKDTLEELRPTVQFYEEVRVWMGKFDAADRQAEGRPVPEE
IKRLLSSLVATSTATGQIVDIYDAAGLPKPSLADLGPDFEAKAKAATNPHLAIEALRATL
TEESARATRNNVVRQREFSERITELMNRYTNQQITSAEVIAELIAMAKEVAAEGGRGQKF
SPPLNDDELAFYDAVATNESAVEFQGDDVLAQIARDLVRIMQRDTKFDWTVRDDVRAKLR
SSIKRLLVKYKYPPDKQPAAITTVFEQMEMMAPRFAETTAPDDLTAAH
NT seq 3207 nt   +upstreamnt  +downstreamnt
atgagcgcaattccagaagccgagtgggagaacctggctctcgagtggctggccgaccag
gaatggcaacccctgaagggctccgacatcgcacccggcgtcgaaaacggtcgtaccagg
tgggatgacatcgtcctcccggaccggctgctcgcaaaggtgcgggagttgaatcccggt
gtcccctatgagtatctcgtgcaggcgcgggctgcgatcctcgcacccgagtcgcaagac
ccgctcgccgagaaccatcggctgcacgagatcctcgtcaaggggtaccggggtatcacg
tatgtcgatcatgacggcctcgaacagacaccgaccatccttctggtcggaaatcggccg
gaggacaacgagctactcgccgtccagcaggtcacggtccgcaactcagaacaccagcgc
agatgcgatgtggtgctctacctcaacggcctgcctgtggccttcttcgagctgaagcag
gcaggcgccgctcaggccgatctcgcttcagcccacgcacaactgggaacgtacctgcgc
gagttcccactggtgttccgcttcgcggtggtctccgtcgtcagcgatgtcctcagcgcg
cgatacggcacaccgttcactccgctcgagcactacgccccgtggaacgtcgatgacgac
ggtaagcccctcagcatgggccatcccaccgacccggcacagctgggactcgaactcgag
tacctcatcgacggagtgttcaatcccgaacgctttctccagatcctgcgcaacttcaca
gccttcgacgcgggtgccgacggttacgtcaagcgaatcgccaagccccatcagtacttc
gcggtcacgaaagccgtcggcaacaccgtcgccgctgcggagagcaacggcaaggccggc
gtcgtctggcacacacagggttcgggcaagtcgatggagatggagctctacgcccatctc
gtcgcgcggcagccgaagcttaagaaccccacgatcgtggtcgtgactgaccgccgcgaa
ctcgacggacagctcttcgagacattcaaccgttccgagcttctcgacgagtcaccggtg
aaagtcacaacacgtgagcagctgcgggacgaactgtccaaccgcaccaccggtggcatc
tacttcaccacgctccaaaagttcagccgcacccaagcggagcgggacgccggcgccgac
catccgctcctcaccgatcgccgcaacgtcatcgtcgttgtcgacgaggcacatcgcagt
cactacgacgacctcgacggctacgctcgccacctcgcggatgcggttcccaacgccacc
ctcatcgcgttcaccggcactcctatctcgtttgccgaacgcaacacccgcgaggtgttc
ggcccctatatcgacatctacgatctcacccgtgccgtcgatgacggcgccacggtgccg
gtctatttcgagccgcgtctcatccaggtgaccctcgccgatgaggtgaccgaagacgat
ctcgacagagcagccgacgaggcgaccaaaggtctcgacgatgccgaacgcgcacagatc
gagaagtccgtggcggtcatcaacgccgtgtatggcgctccggaacgcgtcaaggccctc
gcgaaggacatcgtcgagcactgggatggccgttcgaaatcgttggagaccttcatctcc
acaccgggaaaggccttcatcgtcgcggccactcgcgatatcgcggcccggctctacgag
gagatcgttgcgctgcgacctggctggcacgacgaggccgtcgacaagggcgttatcaag
gtcgtctactccggcagcgcgaaagaccaagggctcatcgccaaacacgtccggcgcgac
gctcagaacaagatcatccagaagcggctcaaggaccccgacgacgaactgcagatcgtc
atcgtcaaggacatgatgctcaccggcttcgacgcgccgccactgcacaccctgtacctg
gaccgaccgctcaagggcgccctcttgatgcagaccctggcgcgggtcaacagaaccttc
cgcggcaaaccgtcgggcctcctcgtcgcctatgcaccgctcgtcgacaacctgcagcag
gcgttggccgagtacaccgagacagaccaggccagccaaccggtcggccgcaacatcgac
gaagcggtggcgctgacgcaacagctgatctcacagctggacgatctctgcagtgggtac
gactggcgcacgaaggcgaaagaggctgatcgaggttggattcgcgcggcgatcggtctc
accgaataccttcggtcaccggagactccaggtaacagcgtgccggaaggcgaggaaacg
ctgggcgggcgattccgaacgctcgccgcacatctcgccaaagcctgggcgcttgccggc
ggcaaggacaccctggaagaactccgcccgaccgtgcagttctacgaagaggtccgggta
tggatgggcaagttcgacgccgcggaccggcaagctgagggccgacccgttcccgaagag
atcaagagactcctgtcctccttggtcgcgacctcgaccgccaccggccagatcgtggac
atctacgatgctgccgggctgcccaagccgtctctcgccgatctcgggcccgacttcgag
gcaaaggccaaagctgcgacgaatccgcacctcgcgatcgaggctctgcgagcgacgctg
accgaggaatcggcacgtgccacgcgtaacaacgtcgtccgacaacgagagttctcggag
cgcatcaccgagctcatgaaccgctacaccaaccaacaaatcacctctgccgaggtgatc
gccgaactcatcgcaatggcgaaagaggtcgccgcggaaggcggccgcgggcagaagttc
tcccctccattgaacgacgacgaactcgctttctacgacgccgtcgccacaaacgagtca
gcagtcgagttccaaggcgacgacgtactcgcccagatcgcgcgtgatctcgtccggatc
atgcagcgtgacaccaagttcgactggacggtccgcgatgatgtccgggcgaagctgcgg
tcgtccatcaagcggctgctggtgaagtacaagtacccgccagacaagcaacccgccgcg
atcacgacagtgttcgaacagatggagatgatggccccgcggtttgccgaaaccaccgca
cccgacgatctgaccgccgcacactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (14)   

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