KEGG   Gordonia sp. 135: GKZ92_22710
Entry
GKZ92_22710       CDS       T06305                                 
Symbol
sigM
Name
(GenBank) RNA polymerase sigma factor SigM
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
god  Gordonia sp. 135
Brite
KEGG Orthology (KO) [BR:god00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:god03021]
    GKZ92_22710 (sigM)
Transcription machinery [BR:god03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     GKZ92_22710 (sigM)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 Sigma70_ECF HTH_17 DUF134 HTH_28 HTH_psq Terminase_5 HTH_38 HTH_23
Other DBs
NCBI-ProteinID: QGP90207
UniProt: A0A6I5ZKV1
Position
5026882..5027457
AA seq 191 aa
MAGGNDAVDLRTDEQLLGAHVAGDPGAFSVLVNRHLDYLWSVAIRTSHSPEDAADGLQDA
LLAAHRTAADFRSDARVTSWLHRIVVNACLDRIRRNNARKTVPLPEWDVMSIADTTDDIS
AVDLSVSIGRALHTLPEGQRQAIVAVDLEGYSVAEAASLLGVAEGTIKSRCARGRLKLAQ
VLGHLRTADDA
NT seq 576 nt   +upstreamnt  +downstreamnt
atggccggggggaacgacgcagttgacctgcgcaccgatgagcagttgctgggcgctcac
gtcgccggcgacccgggcgcgttctccgttctcgtcaaccgtcacctcgactacctgtgg
tcggtcgccatccggaccagccatagccccgaggatgctgccgacgggttgcaggacgca
ctgctggccgcgcatcgaaccgcggcggatttccgctccgacgcgagggtcaccagctgg
ctgcaccggatcgtggtcaacgcgtgcctggaccggattcgccgcaacaacgcccgcaag
accgtccccctgcccgaatgggacgtgatgtcgattgcggacacgaccgacgacatctcc
gcggtggacctgtcggtgtcgatcggtcgggcgctgcacacgctgcccgaagggcaacga
caggccatcgtcgcagtcgacctagagggttattcggtcgccgaagcggcgtcattgctc
ggcgtcgccgaggggacgatcaagagccgatgcgcacgggggcgcctcaaactcgctcag
gtcctcggccatctccggactgccgatgatgcgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (17)   

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