KEGG   Gemmata obscuriglobus: C1280_33830
Entry
C1280_33830       CDS       T05475                                 
Name
(GenBank) RNB domain-containing ribonuclease
  KO
K12573  ribonuclease R [EC:3.1.13.1]
Organism
gog  Gemmata obscuriglobus
Pathway
gog03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gog00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    C1280_33830
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gog03019]
    C1280_33830
   03016 Transfer RNA biogenesis [BR:gog03016]
    C1280_33830
Enzymes [BR:gog01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     C1280_33830
Messenger RNA biogenesis [BR:gog03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     C1280_33830
Transfer RNA biogenesis [BR:gog03016]
 Prokaryotic type
  tRNA degradation factors
   C1280_33830
SSDB
Motif
Pfam: RNB S1 RNase_II_C_S1 Rrp44_S1
Other DBs
NCBI-ProteinID: AWM41493
UniProt: A0A2Z3H653
Position
8194385..8195392
AA seq 335 aa
MIRRMRDLALLLRKKRFKRGALELTMPEAVLEYDADGRVSGAHFAEHNLSHQIVEEFMLA
ANEAVAEHFTAHEVSFLRRVHPAPNEDKLEAFAQFAAILGHPIKRPQDRYELQRVLDATA
DKPERAAFHFALLRSFKQATYSPVQDEHYALASHHYCHFTSPIRRYPDLQVHRLLDKWVR
TGSASANTEELAALGEHCSKMERRAETAERELVKTRILSYLSGRLGEQLDAVITGVADYG
FFAQAERFPAEGLVHISSLVDDYYWFDESAHSLEGRRTQRRFRLGDRVRVVVARVDLPRR
MLDLRLADARPKTEDDGGDALPTPGRPPRPRKRRK
NT seq 1008 nt   +upstreamnt  +downstreamnt
atgatccgccggatgcgcgacctcgcgctcctcctgcgcaagaagcggttcaagcgcggc
gcgctcgaactcaccatgcccgaggcggtgctggagtacgacgccgacgggcgcgtgagc
ggcgcgcacttcgccgaacacaacctgagccaccagatcgttgaggagttcatgctcgcg
gcaaacgaggccgtcgcggaacacttcaccgcgcacgaggtctcgttcctgcggcgggtc
cacccggcgcccaacgaggacaagctcgaagcgttcgcccagttcgccgccatcctcggc
cacccgatcaagcgcccccaggaccgctacgaactccagcgcgtgctggacgcgaccgcc
gacaagcccgagcgcgccgcgttccacttcgcgctactgcggagcttcaaacaggccaca
tactcgcccgtccaggacgagcactacgcgctcgccagccaccactactgccacttcact
tcgcccatccgccgctacccggacctccaggtccaccggctcctcgacaagtgggtccgg
accggatcggccagtgcgaacacggaggaactggcggcgctgggcgagcactgctcgaag
atggagcggcgggccgagacggcggagcgcgagctggtgaagacccgcatcctgagctat
ctgagcggcagactcggcgagcagctcgacgcggtcatcacgggcgtcgcggactacggc
ttcttcgcgcaggcggagcggttcccggccgaagggctggtgcacatctcatcgctggtg
gacgattactactggttcgacgaaagcgcgcactcgttagaggggcggcggacgcaacgg
cggttccggttgggggaccgcgtccgggtggtcgtcgcccgggtcgatttgccgcggcgg
atgctggacctgagactggccgacgcgcggccgaaaacggaagatgacgggggcgacgct
ctccccactcccggccgccccccgcgcccgcggaagcgccgcaagtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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