KEGG   Gordonia insulae: D7316_00827
Entry
D7316_00827       CDS       T05722                                 
Symbol
ruvB_1
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
gom  Gordonia insulae
Pathway
gom03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:gom00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    D7316_00827 (ruvB_1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gom03400]
    D7316_00827 (ruvB_1)
Enzymes [BR:gom01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     D7316_00827 (ruvB_1)
DNA repair and recombination proteins [BR:gom03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     D7316_00827 (ruvB_1)
    RecFOR pathway proteins
     D7316_00827 (ruvB_1)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 Mg_chelatase TIP49 AAA_16 IstB_IS21 Zeta_toxin nSTAND3 RNA_helicase AAA_3 HTH_AsnC-type AAA_14 AAA_33 Resolvase TsaE Sigma54_activ_2
Other DBs
NCBI-ProteinID: AZG44243
UniProt: A0A3G8JGW2
Position
853857..854948
AA seq 363 aa
MTRDEMPDPDERPVSPTEQPTDGDFDAGLRPRSLADFIGQPRVCEQLELVLQGAKGRGGT
PDHILMSGPPGLGKTSLAMIIAAEMGAAIRVTSGPALERAGDLAAMLSNLVDGDVLFIDE
IHRIARPAEEMLYLAMEDFRVDVVVGKGPGATSIPLDVAPFTLVGATTRSGSLTGPLRDR
FGFTAHMEFYETDELVRVLRRSAGILGIRLLPDASTEIARRSRGTPRIANRLLRRVRDYA
EVRSDGVVTVEVARAALAVYDVDDLGFDRLDRAVLNALVRGFGGGPVGVSTLAVAVGEEP
TTVEEVCEPFLVRAGMMARTPRGRVATAAAWHHLGLTPPAGAMNASFGVRSRDAITESLF
DDL
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgacccgcgacgagatgcccgatcccgacgaacgtccggtgagtccgaccgaacagccc
acggacggcgacttcgacgcgggcctgcggccacgctcgctggccgacttcatcggccag
ccccgggtgtgcgagcagctcgaactcgtcctgcagggggcgaaggggcgcggtggcact
cccgaccacatcctgatgtcgggtccgcccggactgggcaagacgtctctggcgatgatc
atcgccgccgagatgggagccgcgatccgcgtcacctcggggccggcgctggaacgagcg
ggtgacctcgccgcgatgctgtccaacctggtcgacggcgacgtgctgttcatcgacgag
atccaccgcatcgcccggcccgccgaggagatgctctacctcgccatggaggacttccgt
gtcgatgtcgtcgtggggaagggcccgggcgcgacgtccatcccactcgacgtcgcgccg
ttcaccctggtcggtgccaccacgcgatccggttcgctgaccggcccgttgcgtgaccgc
ttcggcttcaccgcgcacatggagttctacgagaccgacgagctggtccgggtcctgcgt
cgatccgcgggcatcctcggcatccgactgctgccggatgcgtccaccgagatcgcgcgt
cgctcgcgggggacgccgcggatcgccaaccggcttttgcgccgcgtgcgcgactacgcg
gaggtccgcagcgacggcgtggtcaccgtcgaggtcgcgcgtgccgcgctcgcggtgtac
gacgtcgacgacctgggtttcgaccgactcgatcgcgcggtgctcaacgcgctggtccgc
gggttcggtggcggtccggtaggggtgtccaccctggctgtcgccgtgggggaggagccg
accaccgtcgaggaggtctgtgagcccttcctggtgcgggccgggatgatggcgcgcacg
ccgcgcggccgcgtcgcgacggccgcggcctggcaccatctcggactgacgccgcccgcc
ggcgcgatgaacgccagtttcggggtgcgatcccgggacgcgatcacggagagcctgttc
gacgatctatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (19)   
   Pfam (19)   
All databases (28)   

Download RDF
DBGET integrated database retrieval system