KEGG   Gordonia phthalatica: ACH46_06215
Entry
ACH46_06215       CDS       T04097                                 
Name
(GenBank) RNA polymerase sigma factor SigD
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
goq  Gordonia phthalatica
Brite
KEGG Orthology (KO) [BR:goq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:goq03021]
    ACH46_06215
Transcription machinery [BR:goq03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     ACH46_06215
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r4 Sigma70_r2 Sigma70_ECF HTH_16 GerE HTH_23 TraL_transposon
Other DBs
NCBI-ProteinID: ALG84176
UniProt: A0A0N9NEZ1
Position
1326134..1326709
AA seq 191 aa
MKLTGEALGQAVRAAADGDRAALTSVLESVREPVLRYCRGRIGAGERHLFSADDVAQEVL
MAVMTALPRYEDQGRPFMAFVYGIASHKVADAMRSAARVKSDPVDEVPDAMDFANGPEQA
ALESDASRRMRDLLGTLPEKQREILVLRLVVGLSAEETAEIVGSSPGAVRVAQHRALTKL
KKTVKAGGERR
NT seq 576 nt   +upstreamnt  +downstreamnt
atgaaacttacaggtgaggcgttgggccaggcggtccgtgcggccgctgacggcgaccgc
gctgcgctgacctcagttctcgaaagtgtcagggagccagtcctgcgctactgccgagga
cgaatcggtgcaggagaacggcacttgttctccgctgatgacgtggctcaggaggtgttg
atggcggttatgacggcgttgccccggtacgaagaccagggccgacccttcatggcgttc
gtctacggcatcgcctcacacaaggtcgccgacgctatgcgatcggcggctcgggtgaag
tccgacccagtggacgaagtgcccgacgccatggatttcgccaacggcccagagcaggcg
gctctcgagtccgacgcttcgcgccggatgagggacctgctcggcaccctgccggagaag
cagcgcgagatcctcgtgctgaggctcgtggtcgggttgtcagccgaagagactgccgag
atcgtcggcagcagcccgggcgcggtgcgcgtagcgcagcaccgtgccctgacaaagctc
aagaagacagtgaaagcaggaggtgaacgtcgatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system