KEGG   Gordonia phthalatica: ACH46_07170
Entry
ACH46_07170       CDS       T04097                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
goq  Gordonia phthalatica
Pathway
goq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:goq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ACH46_07170
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:goq03021]
    ACH46_07170
   03019 Messenger RNA biogenesis [BR:goq03019]
    ACH46_07170
Transcription machinery [BR:goq03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     ACH46_07170
Messenger RNA biogenesis [BR:goq03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     ACH46_07170
SSDB
Motif
Pfam: ATP-synt_ab Rho_RNA_bind Rho_N Spore_III_AA AAA_25 NACHT
Other DBs
NCBI-ProteinID: ALG84325
UniProt: A0A0N9N2A4
Position
1537189..1539156
AA seq 655 aa
MTETDVQAPKRARTGLSAMLLPELRALAGELGIKGTSGMRKGDLIDVIRAHQHGGAAKAA
APKAEKADKPAVAKQQETKPASSEPAGEAPAAAKVAEKPTEQKTTAPTSEKSADDAKADA
DTRREGTANAGGRQNREQTADGEGGGNRRNRQRNRDNQNRDNQNRDDQRAQGQNDQESGD
KSGDDSTKTQGNQNRDNQNQGNQGQGRNNQGQGNQQKQGQNQGGGQNNQNRDNNRDEDGE
GGGRRSGRRFRERRRGRDRDGGNQGEPQVNEGDVLKPVAGILDVLDNYAFVRTSGYLAGP
DDVYVSMNLVRRNGLRRGDAITGAVKVPRDGDNPNNQRQKFNPLVRLDTVNGTDVEAARK
RPDFTKLTPLYPNQRLRLETTAERLSTRVIDLIMPIGKGQRALIVSPPKAGKTTILQDIA
NAITTNNPECHLMVVLVDERPEEVTDMQRSVKGEVIASTFDRPPSDHTSVAELAIERAKR
LVESGMDVVVLLDSITRLGRAYNNASPASGRILSGGVDSQALYPPKRFLGAARNIENGGS
LTIIASALVETGSTGDTVIFEEFKGTGNAELKLDRKISERRVFPAVDVNLSSTRKDELLL
SPDEFAIVHKLRRLLSGLDSQAAIDLLISQLKKTRSNVEFLMQVSKNAPGVAGDN
NT seq 1968 nt   +upstreamnt  +downstreamnt
gtgaccgaaacggatgtgcaggcaccgaagcgggcccgtaccggactttccgccatgctg
ctgcccgagcttcgtgcgctggcaggcgagctcggcatcaagggcacctcgggcatgcgc
aagggggacctgatcgacgtcatccgagcacatcagcacggcggcgcagcgaaggcagca
gcgccgaaggcggagaaggccgacaagcctgcggtcgcgaaacagcaggagacgaagcct
gcgtccagcgaacctgcaggtgaggctcccgcggccgcgaaggtcgccgagaagccgacc
gaacagaagaccaccgcgccgacgtcggagaagagcgccgacgacgccaaggccgacgcc
gacaccaggcgtgaaggcaccgccaacgccggtggccgtcagaaccgcgagcagaccgca
gacggcgagggcggcggcaaccgccgcaaccgtcagcgcaaccgcgacaaccagaaccgc
gacaaccagaatcgcgatgaccagcgcgcccaagggcagaacgaccaggagtccggcgac
aagtcgggcgacgacagcaccaagacccagggcaaccagaaccgcgacaaccagaaccag
ggcaaccagggtcagggccggaacaaccaggggcagggcaaccagcagaagcagggccag
aaccagggcggcggccagaacaaccagaaccgcgacaacaaccgcgacgaggacggagaa
ggcggcggccgccggagcggacgtcgattccgcgagcgtcgccgcgggcgtgaccgtgac
ggcggcaaccagggcgaaccccaggtcaacgagggtgacgtcctgaagccggtcgccggc
atcctcgacgtcctcgacaactacgccttcgtccgcacctccggatacctggcgggcccc
gacgacgtttacgtctcgatgaacctggtgcgccgcaacggactccgccgcggcgacgcg
atcaccggtgccgtcaaggtgccgcgcgacggcgacaaccccaacaaccagcggcagaag
ttcaacccgctggtccgcctggacaccgtcaacggcaccgacgtcgaggccgcacgcaag
cgccccgacttcaccaagctgacgccgctctacccgaaccagcggctgcgtctggagacc
accgccgagcgactgtcgacccgcgtcatcgacctgatcatgccgatcggcaagggccag
cgcgccctcatcgtctcgccgccgaaggccggtaagacgacgatcctgcaggacatcgcc
aacgcgatcaccaccaacaaccccgaatgccacctgatggtggtcctggtggacgagcgt
cccgaagaagtcaccgacatgcagcgcagtgtgaagggcgaggtcatcgcctccaccttc
gaccgcccgccgtcggaccacaccagcgtcgccgaactcgccatcgagcgggccaagcgt
ctcgtcgagtccggcatggacgtcgtggtgctcctcgactcgatcacccgcctcggccgc
gcgtacaacaacgcgtcgcctgcgtcgggccgcatcctgtccggtggtgtcgactcgcag
gcgctgtacccgccgaagcggttcctcggcgccgcacgcaacatcgagaacggcggctcg
ctgaccatcatcgcgtccgcactcgtcgagaccggctccaccggcgacaccgtcatcttc
gaggagttcaagggcaccggcaacgccgagctcaagctcgatcgcaagatctccgaacga
cgcgtcttcccggccgtcgacgtcaacctttcgagcacccgcaaggatgagctcctgctc
tcgcccgacgagttcgcgatcgtccacaagctgcgtcgactcctctcgggcctcgactcg
caggccgccatcgacctgctgatctcgcagctcaagaagacgcgcagcaatgtcgagttt
ctgatgcaggtcagcaagaacgcaccgggcgtggcgggggacaactga

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