KEGG   Gordonia sp. KTR9: KTR9_4026
Entry
KTR9_4026         CDS       T02216                                 
Name
(GenBank) DNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
gor  Gordonia sp. KTR9
Brite
KEGG Orthology (KO) [BR:gor00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gor03021]
    KTR9_4026
Transcription machinery [BR:gor03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     KTR9_4026
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 Sigma70_ECF HTH_38 HTH_24 HTH_23 HTH_17 AbiEi_1 UPF0122 TnsD
Other DBs
NCBI-ProteinID: AFR50635
UniProt: J9SFV1
Position
4631279..4631833
AA seq 184 aa
MKDTDLSALLARVATGDMDAFAQFYDATCDRVYGMTLRVLRDPGYSEEATQETFLAVWRN
ADAYDPASGSALSWILTLAHRRAVDRVRSESAATRRTVAYGIADTGREIDEVSESVERRE
IARLIHTGLETLTPLQRQAIELAYFHGLTYREVAEHLEVALPTVKSRIRDGLIRLRQTVP
GRAA
NT seq 555 nt   +upstreamnt  +downstreamnt
atgaaagacaccgatctgagcgccctcctcgcccgggtggcgaccggcgacatggacgcg
ttcgcgcagttctacgacgcaacctgcgaccgcgtctacggaatgacgctccgcgtgctg
cgcgacccggggtacagcgaagaggcaacgcaggaaaccttcctcgcggtctggcgcaac
gccgatgcctacgaccccgcctccggttcggcactctcctggattctgacgctcgcgcac
cgccgcgccgtcgaccgcgtccggtcggagtccgccgcgacccgccgcaccgtcgcctac
ggcatcgccgacaccggccgcgaaatcgacgaggtcagcgagtcggtggagcggcgcgag
atcgcccgtctcatccacaccggcctggagacactcaccccgctgcagcgacaggcgatc
gaactcgcctacttccacggactcacctaccgggaggtcgccgaacacctcgaggtggcc
ctgccgaccgtcaagtcccggattcgcgacggcctgatccggctccggcagaccgtcccc
ggtcgcgccgcctga

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (18)   

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