KEGG   Gluconobacter oxydans DSM 3504: GLS_c16440
Entry
GLS_c16440        CDS       T03563                                 
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
goy  Gluconobacter oxydans DSM 3504
Pathway
goy03410  Base excision repair
goy03430  Mismatch repair
goy03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:goy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    GLS_c16440 (recJ)
   03430 Mismatch repair
    GLS_c16440 (recJ)
   03440 Homologous recombination
    GLS_c16440 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:goy03400]
    GLS_c16440 (recJ)
DNA repair and recombination proteins [BR:goy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     GLS_c16440 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     GLS_c16440 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      GLS_c16440 (recJ)
SSDB
Motif
Pfam: RecJ_OB DHHA1 DHH
Other DBs
NCBI-ProteinID: AHK71522
UniProt: A0A067Z5Y8
Position
complement(1891967..1893766)
AA seq 599 aa
MLADDTGAVLGVTRSAGHRRWIWRDPRLAEADNRLALALAQQAGIPELLARILSARGVAP
HDASSFLNPRLRDAMPDPSCLQDMDRAAERLAQAVRNREHVGLFGDYDVDGACGTALVCD
TLRELGCTVSTHIPDRLTEGYGPNTEALENLLSEGATLLVCIDCGTAAIDILNGLTDRAD
IIVLDHHKPDGAALPKGIVVNPNRLDCTSGLGSICATAVAFLTMVATIRHLRRTNWFDEG
QVIPDLLKRLDLTALATICDVMPLTGLNRALVMQGLRVMSRGERLGLATLSSVAGVKEEA
SAMACGFALGPRINAGGRIAQADLGLKLLLSDDVVEARALAEQLDRVNRQRQTVESTILD
SAMEQAQQQLDAGHAVIFLHGETWHPGVVGIVAGRLKERYNRPALVAALTDGVIKGSGRS
VPGLDLGTAIIAARQNGLLLTGGGHAMAAGFSLSADRTDEFHSWLDTQLSSALTLPKQDA
LKLDGIMTLAGASIAVADQLARLEPFGPGNEEPVLAISNIRCVKSERIGKDGNTLRVILQ
GEDGGTRLRGLVFRAADKPFAALLEDRSMPLVHVAGTLRAETWQERKNLSFFISDAAPA
NT seq 1800 nt   +upstreamnt  +downstreamnt
atgctcgcagacgatacgggtgccgtcctcggcgtaacccgaagtgcaggacaccgccgc
tggatctggcgcgatccccgcctggcggaagcagacaatcgcctggcactcgccctggcc
cagcaggccggtattcccgaacttctggcccgtatcctctcggcacgaggcgtcgctccc
cacgacgcctcttcgtttctcaatccccgtctgcgcgatgccatgcccgacccgtcctgc
ctgcaggacatggaccgggccgccgaacgcctcgcacaggccgtgcgcaaccgcgagcat
gttggcctgttcggcgactacgacgtggacggcgcctgcggaactgccctcgtctgcgac
acgctgcgcgaactcggctgcaccgtcagcacccacattcccgaccgcctgaccgaaggc
tacggccccaacaccgaagcccttgaaaacctgctctccgaaggcgccacgcttctggtc
tgtatcgactgcggcacagcagcgatcgacatcctcaacggcctgaccgaccgtgccgat
atcatcgtcctcgaccaccacaaacccgacggggcagccttaccgaaaggcattgtggtc
aacccgaaccgtctggactgcacctccgggctgggaagcatctgcgccacggcggtcgcc
ttcctcaccatggtcgccacgatccgccatctgcgccgcaccaactggttcgatgaaggt
caggtcattcccgacctgctcaaacgcctcgacctcacggcgctggcgaccatctgcgac
gtcatgcctctgaccggcctgaaccgcgctctggtcatgcagggcctgcgcgtcatgtcc
cgtggcgagcgcctcggactggccacgctgtcctccgtcgcaggcgtgaaagaagaagcc
agcgccatggcctgcggctttgccctcggtccccgcattaatgctggtggccgcatcgca
caggccgatctgggcctgaaactcctgctgtcggacgatgtcgtggaagcccgcgccctc
gccgaacagctcgaccgcgtcaaccgccagcgccagaccgtcgaatccacaatcctcgat
tccgccatggaacaggcacagcagcagctcgatgcgggccacgccgtcatcttcctgcat
ggtgaaacatggcaccccggcgtcgttggcatcgtcgcaggccgcctgaaagagcgctac
aaccgccccgccctcgtcgcggccctgacggatggcgtcatcaagggctcgggccgctcc
gtccccggactggatctcggaaccgccatcatcgccgcccgtcagaacggcctgctcctc
accggcggcggccacgccatggcagccggcttttcgctttctgccgatcgcacggatgag
ttccacagctggctcgacacacagctttccagcgccctcacccttcccaaacaggacgcc
ctgaagctcgacggcatcatgaccctggccggcgcctccatcgctgtcgccgaccagctt
gcccggctggaacccttcggccccggtaacgaagaaccggtcctcgccatcagcaatatc
cgctgcgtcaaaagcgagcgtatcggcaaggacggcaacaccctgcgcgtcatcctgcaa
ggcgaggacggaggcacacgcctgcgcggcctggtcttccgtgcagccgacaaacccttc
gccgccctgctggaagaccgctccatgccactggtccatgtcgcaggcacattgcgggcc
gagacatggcaggagagaaaaaatctgtcttttttcatttctgacgctgcccccgcttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

Download RDF
DBGET integrated database retrieval system