KEGG   Gordonibacter pamelaeae: GPA_18860
Entry
GPA_18860         CDS       T02609                                 
Name
(GenBank) Type IV secretory pathway, VirD4 components
  KO
K03205  type IV secretion system protein VirD4 [EC:7.4.2.8]
Organism
gpa  Gordonibacter pamelaeae
Pathway
gpa03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:gpa00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    GPA_18860
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:gpa02044]
    GPA_18860
Enzymes [BR:gpa01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     GPA_18860
Secretion system [BR:gpa02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   GPA_18860
SSDB
Motif
Pfam: T4SS-DNA_transf TraG-D_C TrwB_AAD_bind IstB_IS21 AAA_7
Other DBs
NCBI-ProteinID: CBL04294
UniProt: D6E997
Position
complement(1895399..1897288)
AA seq 629 aa
MAKNGKNGVPVATTARKREASQGFIALMAGISLVAFVAVNHVAGYVIPVASSRGPAAALT
SIPVALLDFARSPWALSLDPAAVAVGLAGPAAVVLVYLLGGKKADKPTMAGMEHGTARWG
EEDEKDRHADTDNPLNNIPLAQGVELCLDPDAIGTRRKGFVEINRNVMCFGPPGTGKTFY
LFVPALLRFWRPTDPSSITSDTKGTTVKRMLPYLMRHDRVVKVLNTKDPSNSHGYNPLKY
TRNDLEVLIAVDTIMGNTTGRKPDEGVDGDFWEKSEKSVFVSIIGGLRELKEIAPGLDVE
VNIPTMADILLTAEASSDDEDPNTPTTIDRFFALIEHLKPDSYACRTYKGLKLAGKGRTM
NSILVSCAVRLMPFNLPVIRELMWRDEMEIDRIPFEGTNLFVVADDAGGQLDFVLAMFYQ
QTFRTLYNIADNLPGERFPVPVVSFIDEMLNMGNIPYKERILMTARSRNMPIVMGLQSMD
LAKEKWGENILGAILDACDTIVYMGGGRSKESRAYISESLGTQTVYEHTVSETVSARIMG
SNDSAQSSYQSLGRPLLDEAEVDKIPREQCIVHFSGAAPLMVGKYRTQDTDEYKDSPFAP
DRRGEAVTGPFPLQEMREHNARVRASLAA
NT seq 1890 nt   +upstreamnt  +downstreamnt
atggccaagaacgggaaaaacggggtgcccgtcgcaacgacggcgcgcaagcgggaggcg
agccaggggttcatcgccctcatggccggcatctccttggtcgcgttcgttgcggtcaac
catgtggcgggctacgtcatccccgtcgcctcgtcgcgcgggcccgcggcggcgctcacg
agcatcccggtagccctgctcgacttcgcgcggagcccttgggcgctgagcctcgacccg
gccgccgtggccgtcgggctcgcggggccggcggccgtcgttctcgtgtacctgctcggc
ggcaagaaggccgacaagccgaccatggcgggcatggagcacggcaccgcgcgctggggc
gaggaggacgagaaggacaggcacgccgacacggataacccgctgaacaacataccgctc
gcccagggcgtcgagctctgcctcgaccccgatgcgatagggacgcgccggaagggcttc
gtggagatcaaccgcaacgtgatgtgcttcggcccgccaggcacgggcaagacgttctat
ctgttcgtccccgcgctcctgcggttctggcggcccaccgacccgtcgagcatcacgagc
gacacgaagggcacgaccgtgaagcggatgctgccgtacctcatgaggcacgaccgcgtg
gtgaaggttctcaacaccaaggatccgtccaacagccacggctacaacccgctcaagtac
acgcgcaacgatttggaggtgctcatcgccgtcgacaccatcatgggcaacaccacagga
cgcaagcccgatgagggcgtcgacggggacttctgggagaaatccgagaaatcggtgttc
gtgtccatcatcggaggcttgcgcgagctgaaggagatagctccggggctcgacgtcgag
gtgaacataccgacgatggcggacatcctgctcaccgccgaggcttcgagcgacgacgag
gatccgaacacgcccacgaccatcgaccgtttcttcgcgctgatcgagcatctgaagccg
gacagctacgcctgccgcacctacaaaggcctgaagctggccggcaagggccggacgatg
aactccatcctggtgtcgtgcgcggtcaggctcatgcccttcaacctccccgtcatccgc
gagctcatgtggcgcgacgagatggagatcgaccgcatacccttcgagggcaccaacttg
tttgtcgtggccgacgatgctggcggccagctcgacttcgtcttggccatgttctaccag
cagacgttccgcaccctctacaacatcgccgacaacctgccgggggagaggttcccggtc
ccggtcgtgtcgttcatcgacgagatgttgaacatgggcaacataccctacaaggagagg
atcctcatgaccgcccgctccaggaacatgccgatagtgatgggcctccagagcatggat
ctcgcgaaggagaaatggggcgagaacatcttgggcgcgatcctcgacgcctgcgacacg
atcgtctacatgggcggcggccgctcgaaggagagccgcgcgtacatctcggagtccctg
ggtacccagacggtctacgagcacacggtgagcgagacggtgagcgcccggatcatgggc
agcaacgattccgctcagtcgtcgtaccagtcgctcggccgcccgctgctcgacgaggcc
gaggtcgacaagataccgcgggagcagtgcatcgtccacttctcgggcgccgcgcccctc
atggtgggcaagtaccgcacgcaggacacggacgagtacaaggactcgcccttcgcgccc
gaccgaaggggcgaggccgtcacagggcccttccctttgcaggagatgagggagcacaac
gcgagggtgcgggcatcccttgccgcttga

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