KEGG   Gamma proteobacterium HdN1: HDN1F_04980
Entry
HDN1F_04980       CDS       T01300                                 
Name
(GenBank) 4Fe-4S ferredoxin, iron-sulfur binding protein
  KO
K18979  epoxyqueuosine reductase [EC:1.17.99.6]
Organism
gpb  Gamma proteobacterium HdN1
Brite
KEGG Orthology (KO) [BR:gpb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:gpb03016]
    HDN1F_04980
Enzymes [BR:gpb01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.99  With unknown physiological acceptors
    1.17.99.6  epoxyqueuosine reductase
     HDN1F_04980
Transfer RNA biogenesis [BR:gpb03016]
 Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    HDN1F_04980
SSDB
Motif
Pfam: Fer4_16 QueG_DUF1730 Fer4_10 Fer4_7 Fer4_6 Fer4 Fer4_9
Other DBs
NCBI-ProteinID: CBL44081
UniProt: E1VGY9
Position
complement(605822..606871)
AA seq 349 aa
MTDSQLQRLVAQLHEWARELGFQALGITDTQLDLPADRLGAFLEQGRHGSMQWLENHQEK
RRHPALLELGTFRVISVRMDYWTDSDAKANLQNQERAYISRYALGRDYHKMMRRRLAQLA
DKLRAEVESSTLGRAFVDSAPVMEKPLAEKAGIGWQGKHTLIINKKAGSYFFLGEIYTDI
PLPIDTPASNHCGTCTACITACPTAAIVAPYELDARRCITYQTIENKGAIDLELRPMMGN
RVFGCDDCQLVCPWNKFAQFSENDDFKPRHSLDQSSLAELFLWSENDFLDRTQGSAIRRA
GYEGWLRNIAVGLGNGPFTPTVIQALEQRRGFSALLDEHIDWALKRLLE
NT seq 1050 nt   +upstreamnt  +downstreamnt
atgactgactcccagctccagcgacttgtcgcacaattacacgaatgggcgcgcgaactc
ggctttcaagcgctcgggatcaccgatactcaactggatcttccggcggatcggctaggc
gctttcctagaacaaggccggcatggcagcatgcaatggcttgagaaccatcaggaaaag
cgccgccaccctgctctactcgaactaggaacgtttcgcgttatttccgtgcgaatggat
tattggacggattccgacgcaaaagccaatctgcagaatcaagagcgcgcttatatttcg
cgttatgcgttagggcgcgactatcacaaaatgatgcgccgacgccttgctcaattggct
gacaaactgcgcgcagaagttgaaagctccactcttgggcgcgcctttgtggatagcgcc
ccggtaatggaaaagccgcttgcagaaaaagccggtatcggctggcagggaaagcacacg
ctaatcatcaataaaaaggccggcagttatttttttcttggtgagatctacaccgatatc
ccccttccaatcgacacgcctgccagcaaccactgcggcacctgcactgcctgcatcacc
gcctgcccaaccgctgcaattgtcgcaccttacgaactggacgcaaggcgctgtatcacc
taccaaaccatcgagaacaaaggcgcgatcgacctagaactacgcccaatgatgggaaac
cgcgttttcggttgcgatgactgccaactggtatgcccgtggaataaattcgcacaattc
agcgaaaacgatgatttcaaaccgcgccattcactagatcaatcctctttggccgagctt
tttttatggagcgaaaacgattttttggaccgcacgcaaggttctgcaattcggcgggca
ggctatgaaggctggttgcgtaatatcgcggtggggctaggtaatgggccgttcactccg
acggtgattcaggcactggaacagcggcgcggcttttctgctttgttggatgagcatatt
gattgggctctcaagcggttgttagagtga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (31)   

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