KEGG   Gamma proteobacterium HdN1: HDN1F_10300
Entry
HDN1F_10300       CDS       T01300                                 
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
  KO
K02945  small subunit ribosomal protein S1
Organism
gpb  Gamma proteobacterium HdN1
Pathway
gpb03010  Ribosome
Brite
KEGG Orthology (KO) [BR:gpb00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    HDN1F_10300 (rpsA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:gpb03011]
    HDN1F_10300 (rpsA)
Ribosome [BR:gpb03011]
 Ribosomal proteins
  Mitochondria/ Chloroplast
   Small subunit
    HDN1F_10300 (rpsA)
  Bacteria
    HDN1F_10300 (rpsA)
SSDB
Motif
Pfam: S1 Spt6_S1 PCB_OB S1_2
Other DBs
NCBI-ProteinID: CBL44613
UniProt: E1VIH1
Position
1287114..1288769
AA seq 551 aa
MMESFAELFEESLKQTNMNPGSIVVGTVVAVDSDWVTVYAGLKSEGVIPRDQFDGEVNVG
DEIEVALESIEDGYGETRLSREKAKRAEAWRRLEAACEASQIVKGIINGKVKGGFTVDVD
AVRAFLPGSLVDIRPVRDTAHLEGKELEFKVIKLDAKRNNVVVSRRAVLEAENSAEREAL
LSNLQEGMEVKGIVKNLTDYGAFVDLGGIDGLLHITDMAWKRIKHPSEIVAVGDEILVKV
LKFDRDRNRVSLGLKQLGSDPWVEIKARYPEGARVKARVTNLTDYGCFAELQEGVEGLVH
VSEMDWTNKNIHPSKVVSIGEEIEVVILDIDEERRRISLGVKQCKPNPWEEFATHFNKGD
RISGKIKSITDFGIFIGLDGGIDGLVHLSDISWDLPGEEAVRAYKKGDEIDTVILSVDPE
RERISLGVKQLSEDPFTAYLNDNDKGAVVKGTVKSVDAKGAVVELRDGVEAVLKASEISR
DRIEDARNALKEGDVIEARIIAVDRKNRAINLSVKAKDAADEKEAMKTLSQDDAVAPRTI
GDLIKAQMGRD
NT seq 1656 nt   +upstreamnt  +downstreamnt
atgatggaaagttttgccgaactttttgaagaatccctgaaacaaaccaacatgaaccca
ggctccatcgtggtcggcaccgtcgttgccgtcgatagcgattgggtgacggtttatgca
ggcctcaagtctgaaggcgttattccgcgcgaccagtttgatggagaagtgaacgtcggt
gacgagatcgaagttgcgcttgagtccatcgaagacggctatggtgaaacccgactctcc
cgtgaaaaggcgaagcgcgcagaggcttggagacgtttggaagctgcttgcgaagcaagc
cagatcgtcaagggcatcatcaacggcaaggtcaaaggcggatttaccgtcgacgtcgat
gccgtccgcgcattcttgccgggctcgctcgtcgatattcgccccgtccgtgacaccgca
caccttgaaggcaaggaacttgagtttaaagttatcaagttggatgccaaacgcaataac
gttgtagtctcccgccgcgcagttctggaagctgaaaacagcgccgagcgtgaagcactg
ctttccaacctgcaagaaggtatggaagttaaaggtatcgttaagaacctgaccgactac
ggcgcgttcgtagatctgggcggcatcgacggcttgctgcacattaccgacatggcttgg
aagcgcatcaagcacccaagcgaaatcgttgcagtaggcgacgagattctggtgaaagtg
ctcaagttcgatcgcgatcgcaaccgcgtatccctcggcctgaagcaactgggttccgat
ccatgggtcgaaatcaaggcgcgttatccagaaggtgctcgcgtaaaagcgcgtgttacc
aacctgaccgactacggctgcttcgctgaactgcaagaaggcgttgaaggcctcgtgcac
gtttccgaaatggattggaccaataagaacattcacccatcgaaagtcgtttcgattggc
gaagaaatcgaagtggtcatcctcgacattgatgaagagcgccgccgtatttccttgggt
gttaagcaatgcaagccaaacccatgggaagagtttgcaacgcacttcaacaaaggcgat
cgcatttccggcaagatcaagtcgatcactgatttcggtatcttcattggcttggatggc
ggcattgacggcctcgttcacctgtctgacatttcttgggatttgccaggagaagaagcg
gttcgcgcctataagaaaggcgacgaaatcgacaccgtcattctgtctgtagacccagag
cgcgagcgtatctcgctgggcgtcaagcagctttctgaagatccgttcaccgcttacctg
aacgacaacgataaaggcgcagtcgtaaaaggcaccgtgaagtcagtcgatgccaagggc
gcagttgttgaattgcgcgatggcgttgaagctgtgctcaaagcctctgaaatcagccgt
gaccgcatcgaagatgcacgtaatgcgctgaaagaaggggatgtgatcgaagctcgcatt
attgctgttgatcgtaaaaaccgcgcaattaacctgtcggtaaaagcgaaagacgcagca
gatgagaaagaagctatgaagacgctttctcaggatgatgcagttgctccacgcacgatc
ggcgatttgatcaaggcacagatgggccgtgattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (24)   

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