KEGG   Gamma proteobacterium HdN1: HDN1F_28720
Entry
HDN1F_28720       CDS       T01300                                 
Symbol
recC
Name
(GenBank) Exonuclease V gamma-subunit
  KO
K03583  exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
Organism
gpb  Gamma proteobacterium HdN1
Pathway
gpb03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:gpb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    HDN1F_28720 (recC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gpb03400]
    HDN1F_28720 (recC)
Enzymes [BR:gpb01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     HDN1F_28720 (recC)
DNA repair and recombination proteins [BR:gpb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     HDN1F_28720 (recC)
SSDB
Motif
Pfam: Exonuc_V_gamma RecC_C
Other DBs
NCBI-ProteinID: CBL46455
UniProt: E1VNR3
Position
3532035..3535553
AA seq 1172 aa
MVASSETLTRGLVILHGNRLESLRDLAIEWVRAHPLSPLEDEVFIVQSNGMAQWLKLAFA
EQKGLGISASMRFTMPSRFLWQANRMVLGADSVPETSAFDKSRLVWRIYRWLVHELPAFA
EFSAAETEAPAHSFAALRAYLGDASDVAKCFGLAQRLADLFDQYQVYRADWLNDWQQGRD
VLRNATGEGAFLADVSVPDGQYWQPALWRILLNETSELGQQSGRSKVHQRFLSALSLAKE
CESEWNLPRRIQVFGISSMSTQMLEAIAAIARHAQVMLYVLNPSPHYWMDIMDGRELLGI
HRHRHAHKASLPQGLSSEKMAMRVNPLLAAWGKQGRDYIGLLYHYDANETSHRKIDFFEA
PREVEGDTLLACVQDDIFELRPAPASPADRVPVAAEDLSVQFHLCHSRQREVEVLHDRLL
DLMERVPDLQARDIIVMAPDIEQYAAHVDAVFGNIETDRARYIPFTLSDRRQRASHPLAA
ALDALLRLPDMRFSVSDVLALLDVPAVRKRFDLAETDLSTLRRWMEQAGVRWGLHEAQRS
SLDLPVGFAANTWQFGLRRMFLGYAVGEGQAWQDVQPFAPVSGLEGALAGKLQALMLALE
RLWEQFRCVHTVAAWADNLRAMCDLLFDAEDESDRFILLRFQEAIHDWQMACSEGGIENE
TLPLLVVRESLLSALDSEGLSQRFLAGCVNFCTLMPMRSIPFRVVCLLGMNDGEYPRSRK
PMDFDLMAGRYRPGDRSRRDDDRYLFLEALLSARQVFYVSHVGRSIRDDSTRPPSVLVAQ
LRDYLEAAYCLESDDQEVSSALLDSITFEHPLQPFSARYFGVDPRFFSYAEEWRNAHNAP
AGNAANVLPELRLEFPLSLAQIENFLREPVEWFYATRLEVSQKQEEEADFDNETFSIDAL
QSYEFGKELIEAARLDAVSFDETVARWRREGRIPVAQWGALATHDLYNNAKKVWDSLESI
IGNLHALQEPLEIRVPTDFPRVEDWASSLYCDNSTPERPPYRMLEWRPSKSRGKINKGAK
YHYFIRLWVAQVCLAAQGIEVESVLIAADKVYRLPPISKERALQQLALWIQAMEIGINQP
LAINRDAALGYWRVRLGKIKNVDAALAEAAKIFEAQDKYSNSQLERHPLFWRCYPEWSRM
SEGFERWATELYGDLVQWVHSEAGGDAHDDAE
NT seq 3519 nt   +upstreamnt  +downstreamnt
atggttgcgagcagtgaaacccttacgcgcgggcttgtgattctgcatggaaatcggctt
gaatccttgcgtgatttagccattgaatgggtgcgtgctcacccactttcgccattggag
gacgaagtctttatcgtgcagagtaacggcatggcgcagtggctcaagcttgcgtttgcg
gagcagaaggggctagggattagcgcatctatgcgctttacgatgccatcgcgcttttta
tggcaagcaaatcggatggtgctgggtgcggattcggttcctgagacttctgcttttgac
aaaagccgtttggtgtggcgaatttatcgctggctggttcatgaattgccagcgtttgcg
gaattcagcgcagcagaaacggaagcaccggcgcactcattcgccgcgctgcgtgcatat
ttaggcgatgcgagcgatgttgcgaaatgtttcgggcttgcgcagaggcttgcagatctg
tttgatcagtaccaggtgtatcgggcagattggctcaatgactggcagcagggtagggat
gtgttgcgcaacgcaacgggagaaggtgcgtttctggcagatgtaagtgtcccagatggc
caatactggcagccagcgctctggcgtatccttctgaatgagacttcagagctgggccaa
cagagtgggcgctctaaggtccatcagcgctttttatcggcattgtcgctagcgaaggag
tgcgaatctgaatggaacttgccgcgccgaattcaggtttttggcatttcttcgatgtct
acgcagatgttggaggcgattgctgcaattgcacggcacgcacaggtaatgctttatgtg
ctgaatccatcgccgcattattggatggatattatggatggtcgcgagctgttgggaatt
caccgccatcgccatgcacataaagccagtttgccgcaggggttatcaagcgagaaaatg
gcgatgcgtgtaaatcccttgctggctgcgtggggaaagcaggggcgtgactatattggg
ctgctctatcactatgatgcaaatgagacgtcacatcgtaaaatcgatttttttgaggcg
ccgcgagaggtggaaggcgacaccttgttagcgtgtgtgcaagacgatatttttgagctg
cgcccagcgccagcgagcccggccgaccgcgtccctgtagcggcggaagacctatcggtt
cagtttcatctctgccattctcggcaacgtgaggtagaggttctgcacgatcgcttgttg
gatttgatggagcgagtccctgatttgcaggcgcgcgacattatcgtcatggcgcccgat
attgagcagtatgcagcgcacgtagatgccgttttcgggaatatcgaaactgatcgtgcg
cgttatattccttttaccttatccgaccgaaggcagcgtgccagccatccactcgccgcc
gcgttggatgccttgttgcggcttcccgatatgcgttttagcgtgtcggatgtgttggcc
ttgctggatgttccggcggttcgtaagcgttttgatttggccgagacagacctttcaacc
ctgcggcgctggatggagcaggcaggggtgcgttgggggcttcatgaagcgcaacgaagt
agccttgatctgcctgtcggtttcgctgcgaatacttggcaatttggcctgcgccgtatg
tttttgggctacgcggtgggtgaggggcaggcttggcaggatgtccagccttttgctccg
gtttctggcttagagggggcgttagcgggaaagctgcaagccctgatgttggcgctggag
cgtttgtgggaacaatttcgctgtgtccatacggttgccgcatgggcagataatttgcgc
gcgatgtgcgatttattgttcgatgcagaggatgagtcggatcggtttattctgttgcgg
tttcaggaggcgattcacgattggcaaatggcctgttctgaaggtggcattgagaatgaa
acgctgcccttgctggtggtgagggagtcgctattaagtgctttggatagcgaaggattg
tcgcagcgttttcttgcggggtgcgtgaatttctgcaccttgatgccgatgcgctcgatt
ccgtttcgcgtagtttgtctgcttggaatgaatgatggggaatatcctcgtagccgtaag
ccgatggatttcgacctgatggcggggcgttatcgtcctggtgatcgttcacggcgcgat
gacgatcgttatttgtttctggaggcgctgctctctgcacggcaggtgttctatgtaagc
cacgtggggcgtagtattcgagatgacagcacaaggccaccctcggttttggttgcgcag
ttgcgtgattatcttgaggccgcttactgtttggagagcgacgatcaggaagtttcgtct
gcattgttggattccattactttcgaacacccactgcagcccttcagtgcgcgttatttc
ggcgttgatccgcgatttttttcttatgcagaggagtggcggaacgcgcataacgcacct
gctggaaacgctgcgaatgtgttgccagaattgaggcttgaatttccgctctcgcttgca
caaatcgaaaattttctgcgagagccggtagagtggttttacgcaacccgcttggaagtt
tctcaaaagcaggaagaagaggcagattttgataacgaaaccttttcgattgatgcattg
caatcctacgaatttggcaaagaattgatcgaggcggcgcgtttggatgcggtctccttt
gatgaaaccgtggcacgctggcgtcgtgaggggcgcattccggttgcgcagtggggggcg
cttgcgacccatgatttgtataataatgcgaaaaaagtttgggactcgttagaaagcatc
attggaaatctgcatgcgcttcaagaacccctagaaattcgggttcctaccgactttccg
agggttgaggattgggcgagttctttatattgcgacaattcaacgccggaaaggccaccc
tacaggatgctggaatggcgcccttccaaatcgcgcgggaaaatcaataagggcgcaaag
tatcattactttattcgcctgtgggttgcgcaggtatgccttgccgcgcagggaattgaa
gttgagtcggtgctgatcgcagcagataaagtctatcgtcttcctccaatcagcaaagag
cgtgccttgcagcaactcgctctctggattcaagcgatggagattggcatcaatcaacca
ctcgcgatcaaccgcgacgcagcgcttggctattggcgcgtaagattgggtaaaataaag
aatgtcgatgccgcattagccgaggcggcaaagatttttgaagcgcaagacaaatatagc
aatagccaactcgaacgacaccctcttttctggcgttgctacccagagtggagtcgaatg
tccgaaggcttcgagcgttgggcaacagaactttacggtgacctagtgcaatgggttcat
tcggaagcggggggagatgcgcacgatgacgcagaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (28)   

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