KEGG   Gemmatimonas phototrophica: GEMMAAP_10145
Entry
GEMMAAP_10145     CDS       T04580                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
gph  Gemmatimonas phototrophica
Pathway
gph03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:gph00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    GEMMAAP_10145
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gph03400]
    GEMMAAP_10145
DNA repair and recombination proteins [BR:gph03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     GEMMAAP_10145
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      GEMMAAP_10145
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_30 AAA_33 AAA AAA_22 NACHT UB2H DUF1131
Other DBs
NCBI-ProteinID: AMW05087
UniProt: A0A143BJ61
Position
complement(2412120..2414219)
AA seq 699 aa
MSSLYRLHSPFSPAGDQPRAIAELKSGLHRGDRIQTLLGVTGSGKTMTIANVIEEWGRPT
LVLSHNKTLAAQLYGELKSFFPNNAVEYFISYYDYYQPEAYVPSSDTYIEKDASINEDID
RLRLRATSSLMEREDVVIVSTVSAIYGLGDPVSYRERMVSLARGQQIPRDDILRALVGIQ
YLRNDVAFDRGTFRVRGDTVEIYPAYEEQAVRLELWGDEIERISKIDPVTGDTIATLERM
AIYPAKHFITNRPTIERASKAIRDELAERLAELRMAGKLLEAQRLEQRTNFDLEMLAEIG
TCAGIENYSRHISGRQSGERPACLLDYFPDDFLVVVDESHVTLPQVRAMYNGDRARKLTL
VDYGFRLPSALDNRPLVFDEFMQLVPRLINVSATPGELELQLSEGVVVEQVIRPTGLLDP
VLEVRPVKGQVDDLLHEIHVRERKGERVLVTTLTKRMSEDLTDYLQQMGVRVRYMHSDID
AIERMEIVRGLRLGEFDVLVGINLLREGLDMPEVSLVAILDADQEGFLRSDRSLIQTIGR
AARNLHGRAILYADRITGSMQRAMDETDRRRTIQHEHNVAHGIVPTGVSKSVDEVRFITR
VADARVEREGEAPAPKRLKSESTARSRPELEQLVGELEVAMREAATALDFEAAARLRDQL
FEVRTALGEKPAQARGNTAAPKRPPGSAPMRRAGGKRGR
NT seq 2100 nt   +upstreamnt  +downstreamnt
atgagctcattgtatcgcctgcattcgccattttcgcccgccggcgatcagccgcgcgcc
attgcggaactcaaatccgggctgcatcgcggcgatcggatccagacgttgctcggcgtc
acgggctccggcaagaccatgacgattgccaacgtcattgaggaatgggggcggcccacg
ctcgtgctgtcgcacaacaagacgttggcggcgcagttgtacggggaactgaaatcgttc
tttccgaacaatgcggtcgagtacttcatctcgtactacgactactatcagcccgaagcc
tacgtcccctcaagcgatacatacatcgagaaggacgccagcatcaacgaagacattgat
cggctgcgcttgcgggcaacgtcgtcgctgatggaacgagaagatgtggtgatcgtgtcc
acggtatcggccatctatggcctgggtgatccggtatcctatcgcgagcgcatggtgtcg
ttggcgcgcgggcaacagatcccgcgcgacgatattctgcgcgctctggtcggcattcaa
tatctgcgtaatgatgtcgccttcgatcgcggcacgtttcgcgtgcgtggcgataccgtg
gagatctatccggcctacgaggaacaggcggtacggctggagctgtggggcgacgaaatc
gagcgcatttccaagatcgatccggtcactggagatacaatagccacgctggagcgcatg
gcgatctatccggcgaagcacttcattaccaatcgtcccacgattgagcgggcgtcaaag
gccattcgcgacgaattggcggagcgcctggccgagctgcggatggctgggaagttgctc
gaggcacagcgactggagcagcgcaccaatttcgatctggagatgttggcggaaatcggg
acctgtgctggcatcgaaaattattcgcggcacatcagcgggcgacagtcgggcgaacgt
ccggcgtgtttgctggattatttcccggatgattttctggtcgtggtggacgaatcgcac
gtcacgctgccgcaggtgcgtgcgatgtacaatggcgaccgggcgcgcaagctcacgctg
gttgactacgggttccgtttgccgagtgccttggacaatcgaccgctggtgttcgatgag
ttcatgcaactcgtgccgcggctcatcaatgtgtccgccaccccgggggagctggagttg
cagctgtctgagggggtcgtggtagaacaggtcatccgtcctacgggacttctcgatccg
gtgctcgaggtccgaccggtgaaggggcaggtggatgatctgctgcacgagattcacgtg
cgcgagcggaagggtgaacgggtgctggtcaccacgctgaccaagcgcatgtcggaggat
ctcacggactacctgcagcagatgggcgttcgggtgcgctacatgcattcggacatcgat
gccattgagcgcatggagatcgtccgtggtcttcgcctcggcgagttcgatgtgttggtg
gggatcaatctgttgcgcgaaggactcgatatgccggaggtctccctggtagccatcctt
gatgccgatcaggaaggatttttgcgcagtgatcgctcgctcatccagaccattgggcgc
gcggcgcgcaatttgcacggcagagcgattctctatgccgatcgcattaccggctccatg
cagcgcgccatggatgaaaccgatcgtcggcgtaccattcagcatgagcacaacgtggcg
cacggcattgtgccgaccggggtcagcaagagcgtggacgaagtgcgattcattacgcgc
gtggccgatgctcgtgtggaacgtgaaggggaggcgccggcgcccaagcgcttgaagagc
gagagcaccgcgcgttcccgccccgaactggagcagttggttggggagttggaagtggcc
atgcgggaggccgcgacggcattggactttgaggcggcggcacgattgcgcgatcagctg
tttgaggtgcgcaccgcgctgggggagaagccggcgcaagcgcgtggcaatacggcggcg
cccaagcgaccgccaggcagtgcgcccatgcgtcgggcgggaggaaagcgtgggcgctga

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