KEGG   Geobacter pickeringii: GPICK_13720
Entry
GPICK_13720       CDS       T03568                                 
Name
(GenBank) endonuclease IV
  KO
K01151  deoxyribonuclease IV [EC:3.1.21.2]
Organism
gpi  Geobacter pickeringii
Pathway
gpi03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:gpi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    GPICK_13720
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gpi03400]
    GPICK_13720
Enzymes [BR:gpi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.2  deoxyribonuclease IV
     GPICK_13720
DNA repair and recombination proteins [BR:gpi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     GPICK_13720
SSDB
Motif
Pfam: AP_endonuc_2 PRMT5_TIM Prenyltrans
Other DBs
NCBI-ProteinID: AJE04266
UniProt: A0A0B5BJK4
Position
3032865..3033719
AA seq 284 aa
MNDYFGAHMSIAGGLHNAPGRGVKTGCGVIQIFTQNSNQWRGKIPSDSDVALFREQWEES
GLHEIVCHDIYLINLAAAPGEVREKSLAAFREEMERCARLGITKIVMHPGSHLGEGEETG
IKRICAAFDELFAAAPDFTGKVLLETTAGQGSNLGYTFEHLRAIIDGTAFSDRFGVCYDT
CHTFAAGYDITSREGYDRVFAEFDRIIGIDRLQCFHVNDSKKGLNCRIDRHEHIGQGAMG
LDGFRFLVNDPRFAKIPKVLETPKGDDDEFDIMNLKTLREMVGR
NT seq 855 nt   +upstreamnt  +downstreamnt
atgaacgattatttcggcgcccacatgtccatcgccggcggcctccacaacgcccccggg
cgcggcgtgaagaccggctgcggcgtcatccagatcttcacccagaactccaaccagtgg
cgcggcaagatcccctccgactccgacgtcgccctcttccgggaacagtgggaagagtcg
gggctccacgagatcgtctgccacgatatctacctcatcaacctggccgccgccccgggc
gaggtccgggagaagagcctcgccgccttccgggaggagatggagcgctgcgcccgcctc
ggcatcaccaagatcgtcatgcaccccggctcccacctgggggagggggaagagaccggc
atcaagaggatctgcgcggccttcgacgagctcttcgccgccgcccccgacttcaccggg
aaggtgctcctggagaccaccgccggacaggggtccaacctcggctacaccttcgagcat
ctgcgcgccatcatcgacggcaccgccttctccgaccgcttcggcgtctgctacgacacc
tgccacacctttgccgccggctacgacatcaccagccgtgaggggtacgaccgggtcttc
gccgaattcgaccggatcatcggcatcgaccggctccagtgcttccacgtcaacgactcc
aagaaggggctcaactgccggatcgaccgccacgagcatatcggccagggggccatgggg
ctcgacggcttccggttcctggtgaacgacccgcgcttcgcaaagatccccaaggtcctg
gaaacccccaagggggacgacgacgaattcgacatcatgaacctcaagaccctgcgggag
atggtcggacgttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

Download RDF
DBGET integrated database retrieval system