KEGG   Geobacter pickeringii: GPICK_15510
Entry
GPICK_15510       CDS       T03568                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
gpi  Geobacter pickeringii
Brite
KEGG Orthology (KO) [BR:gpi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:gpi03016]
    GPICK_15510
Enzymes [BR:gpi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     GPICK_15510
Transfer RNA biogenesis [BR:gpi03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    GPICK_15510
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC HHH_5
Other DBs
NCBI-ProteinID: AJE04586
UniProt: A0A0B5BKJ6
Position
complement(3410319..3411464)
AA seq 381 aa
MPDTPVSPDIITSAEGVGRLAERLGGEPIVACDLEADSMHHYQEKVCLLQFAVPGYAAIV
DPLATPDLAPLAPLFADGSRRKVFHGADYDIRSLHRDFGIEVNNLFDTMIACQYLGEREF
GLAAALRKRFGVELDKQYQRADWSRRPLSAGMIEYAVKDTTLLIDLYRQLEGELRERGRL
PWVEEECVLLTGVRMTQRGDDPLFLRFKGASRLDRRTLAVLEEVLRFRDRRARQADVPPF
KILGTDTVRELAEKRPRSAAELVGITGITEKVAARHGEGILRSVEKGMTVPERNLPVFPR
EERRRLSGPEEQRLKALKGWREEEAARLGIDMGYLANNALLEQLAVAAPRSVGELAASGS
LREWQMREFGPGILAALAPRR
NT seq 1146 nt   +upstreamnt  +downstreamnt
ttgcctgacacccctgtttcacccgatatcatcacctccgccgagggggtaggccgcctc
gccgaacgtctcgggggagagcccatcgtcgcctgcgacctggaggccgactccatgcac
cactaccaggagaaggtctgcctcctccagttcgcggtgccggggtatgccgccatcgtc
gaccccctcgccacccccgacctggcaccgctggcccccctcttcgccgatggctcacgg
cgcaaggtcttccacggcgccgattacgatatccggtcactgcaccgcgatttcggcatc
gaggtgaacaacctcttcgataccatgatcgcgtgccagtatctgggggaacgggaattc
gggctggcggcggcgctgcgcaagcgcttcggggtggagctcgacaagcagtaccagcgg
gccgactggagccgccgtcccctcagcgcggggatgatcgagtacgccgtgaaggatacg
acgctcctcatcgacctctatcgccagcttgagggtgagttgcgggagcggggacggctg
ccgtgggtggaggaggaatgtgtgcttctcaccggggtgcggatgacgcagcgcggcgac
gatccgctgtttcttcgtttcaaaggggcatcgcggctggaccgccggaccctggcggtg
ctggaggaggtccttcgcttccgtgaccggcgtgcccggcaggccgacgtcccgccgttc
aagatcctcggcaccgacacggtgcgggagctggccgagaagcgcccccggtcggcagcg
gagctcgtggggatcacggggattacggagaaggtggcggcgcgccacggcgaagggatt
ctgcggtcggtggagaaggggatgacggttccggagcggaacctgccggtctttccccgg
gaggagcgccggcggttgagcggccccgaggagcagcggctgaaggcgctgaaagggtgg
cgcgaggaggaggcggcccggctcgggatcgacatggggtacctggccaacaacgccctg
ctggagcagctggccgtcgccgccccccgctcggtcggggagcttgccgccagcggctct
ctgcgggagtggcagatgcgggaattcgggccggggatcctggcggccctcgctccccgc
cggtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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