KEGG   Geobacter pickeringii: GPICK_15670
Entry
GPICK_15670       CDS       T03568                                 
Name
(GenBank) DNA polymerase III subunits gamma and tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
gpi  Geobacter pickeringii
Pathway
gpi03030  DNA replication
gpi03430  Mismatch repair
gpi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:gpi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    GPICK_15670
   03430 Mismatch repair
    GPICK_15670
   03440 Homologous recombination
    GPICK_15670
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gpi03032]
    GPICK_15670
   03400 DNA repair and recombination proteins [BR:gpi03400]
    GPICK_15670
Enzymes [BR:gpi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     GPICK_15670
DNA replication proteins [BR:gpi03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     GPICK_15670
DNA repair and recombination proteins [BR:gpi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     GPICK_15670
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 AAA RuvB_N AAA_22 AAA_5 AAA_30 AAA_16 AAA_19 AAA_2 AAA_14 Sigma54_activ_2 DUF815 PIF1 AAA_18 Glyco_tranf_2_5 DUF397 nSTAND3 AAA_24 AAA_28 TsaE
Other DBs
NCBI-ProteinID: AJE04615
UniProt: A0A0B5BJE0
Position
complement(3444101..3445873)
AA seq 590 aa
MSYLVLARKWRPQTFSDLTGQGHVSQTLKNAIDSGRIAHAFLFTGARGVGKTSSARILAK
ALNCEQGMSPEPCNQCPACLEITAGTSVDVLEIDGASNTGVDDIRELRENVKYLPSRLRY
KIFIIDEVHMLSTSAFNALLKTLEEPPPHVKFVFATTEPHKVPITILSRCQRFDFKRIPL
GQVVERLRYIVDQERIAISDGALTVVARKGDGSMRDSLSVLDQVLAFCGDQVRDEEVASL
LGVVDRRLLLEASASVLARDTARALGVAAKVDGYGYSMRQFCGELIDHFRNLTILVAVAD
PRDLLDLSEAELAALREQAAQAPLPDLQRHLATLLRAEGEMAQSSYPRLLLEMALIKMAT
LAPLMPVDELLERLKKIEAGGGGGVADARAQWRPTAASPAPSPAARPPEQRPAPPASSSA
PAARPAGGGTPAPVRPAPGAAATTAPAAPVLRRTGDEWADFVAFVKGAKMPLGSMLERGS
PLAVTAERLEIGFPEGSFVLTSLRDGDSLASLKELATRFFGAEPAVVLKAMRGGGGEAPP
NLLEKKRVETERRQADLREAAASHPVVSVALDVFDGTIAEVIPLEQREKL
NT seq 1773 nt   +upstreamnt  +downstreamnt
ttgtcctatctcgtccttgctcgaaaatggcgcccccagaccttcagtgacctcaccggc
caggggcacgtcagccagacgctgaaaaacgccatcgactccggcaggatcgcccatgcc
ttcctctttaccggcgcccggggagtggggaaaacatcgtcggcccgcatcctggccaag
gcgctcaactgcgagcaggggatgagccccgagccgtgcaaccagtgccccgcctgcctg
gagatcaccgccggcacctcggtggatgtcctcgagatcgacggcgcctccaataccggc
gtcgacgatatccgcgagctgcgcgagaacgtcaagtacctgccgtcacggctccgctac
aagatcttcatcatcgacgaagtccacatgctctccacgagcgccttcaacgccctgctg
aagacgctggaggagccccctccccacgtcaagttcgtttttgccaccaccgaaccccac
aaggtcccgatcaccatcctctcccgctgccagcgtttcgacttcaagcggattccgctc
ggtcaggtggtggagcggcttcgctacatcgtcgaccaggaacggatcgccatcagcgac
ggagcgctcaccgtcgtggcccgcaagggggatgggagcatgcgcgattccctttcggtg
ctcgaccaggtcctcgccttctgcggcgaccaagtccgggacgaggaggtggcgagcctc
ctcggcgtcgtcgaccggcggctgctgctggaggcgtcggcgtcggtccttgcccgcgac
accgcccgggccctcggggttgccgcaaaggtggacgggtacggctacagcatgcggcag
ttctgcggcgaactgatcgaccatttccggaacctgacgatccttgtggcggtggctgac
ccccgggatctcctcgatctctccgaggccgagctcgcggcgctccgggagcaggcggct
caggcgccgcttcccgacctccagcgccacctggcgactctgcttcgggcggagggggag
atggcccagtcatcctatccccggctcctgctggagatggccctgatcaagatggcgacc
ctcgcaccgctgatgccggtggacgagcttctggaacggctgaagaagatcgaggccggc
gggggagggggtgtcgccgatgcccgcgcccagtggcgcccgacggcggcttccccggcg
ccgtcccccgcggcgcgtcctccggagcagcgcccggcgccgccggcatcatcttcggct
cccgcggcgcgccctgccggaggggggactccggcgccggtgcgccctgctcccggtgcg
gcggcaacgaccgcccccgcggctcccgtgctgcgccggacgggggacgagtgggcggat
ttcgtcgccttcgtcaaaggggcaaagatgcctctcgggtcgatgctcgagcgtggcagc
ccccttgccgtcaccgccgaacggcttgaaatcggttttcccgaaggttccttcgtcctg
acgagcctcagggacggcgactccctagcctccctgaaggagctggcgacgcgcttcttt
ggtgccgagccggccgtggtcctcaaggcgatgagggggggcggaggcgaagcgccgccg
aatctcctggaaaaaaaaagagttgagaccgaacggaggcaggcagacctccgggaagcg
gctgcgtcacatccggtggtttccgttgccctcgatgtcttcgacgggactatcgccgag
gtgattccccttgaacagagggaaaaattataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (21)   
   Pfam (21)   
All databases (34)   

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