KEGG   Gordonia polyisoprenivorans: GPOL_c02150
Entry
GPOL_c02150       CDS       T01719                                 
Name
(GenBank) putative exonuclease RNase T/DNA polymerase III
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
gpo  Gordonia polyisoprenivorans
Pathway
gpo03030  DNA replication
gpo03430  Mismatch repair
gpo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:gpo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    GPOL_c02150
   03430 Mismatch repair
    GPOL_c02150
   03440 Homologous recombination
    GPOL_c02150
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gpo03032]
    GPOL_c02150
   03400 DNA repair and recombination proteins [BR:gpo03400]
    GPOL_c02150
Enzymes [BR:gpo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     GPOL_c02150
DNA replication proteins [BR:gpo03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     GPOL_c02150
DNA repair and recombination proteins [BR:gpo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     GPOL_c02150
SSDB
Motif
Pfam: TerD RNase_T BRCT PE-PGRS_C
Other DBs
NCBI-ProteinID: AFA71288
UniProt: H6MRE3
Position
258390..260147
AA seq 585 aa
MGEWVLVDVETSGTSARRDRVLSLAAMTLDSSGRVQEEYATLLDADCDPGPVHIHHLTRK
RLRGAPTFDATLPHLDRMLAGRTLVAHNASFDHGFLVEEARRFGTTLPISHRLCTVTLAR
RLQLNVPNVKLGTLAAYWGIPQASAHDARDDVKTLAEVFRHCVDLANSLGLGLPIVGCAG
ASRAYPDKVTRVPCPWRDPGRYRSTVGLIQGTKVVITGPTRLPRTELGRRLSDAGLDVMN
SISGRTGLVVANQDAPDSRKLQRAAELGITVVDESTVLRLCSDIVAGVLKSAPESIEVVT
IIDAPSVEPAPATPVRGPWAGRRVLVMGGSHVEATVMRSRIVQLGAAPAINLTAGVTDVL
LLDGGAGDPRMPRVRDRSLTILEMHHIDAALGIGSDPAEKHDDADSSQQEWTPAMMPPGA
VIDLPAGLMTFTVNVAWTAARAKSPEVDVVAFELGDDEKVLSDDEFVFFNQPASPDGALT
LSIDGDCEQGVHVDLQSVPAEVARITIGAAIEEMTFGELGALSVSVDTPNATVVSAVLDA
ATTERSMIIAEIYRRKTQWRLRMLGQGYDDDLGGFAVRHGVDVEE
NT seq 1758 nt   +upstreamnt  +downstreamnt
atgggtgagtgggtcctggtcgatgtcgaaacctccgggacgagtgcacggcgcgaccgg
gtgctcagcctggcggcgatgacgttggactcgtccgggagagtgcaggaagagtacgcg
actctccttgacgcggactgtgatcccggtccggtgcacattcatcacctgactcgcaag
cgcttacgtggcgcaccaacgttcgacgcaactctgccgcatctggatcgcatgctcgcc
gggcgaacgctcgtcgcgcacaatgcctcttttgaccacggattcctcgtcgaagaggca
cgccgattcggtacgacgttgccgatcagtcatcgcttgtgcactgtcacgcttgcgcgg
cgattgcagttgaacgtacccaacgtgaagttggggacgctcgcggcgtactggggtatc
ccacaggcaagcgcccacgatgcgcgcgacgacgtcaagacactggcggaggtctttcgc
cactgcgttgaccttgcgaattccttggggctcggtcttccgatcgttggctgtgcgggc
gcgtctcgtgcctatcccgacaaagtgacgcgcgtgccctgcccctggcgtgatccggga
cgctataggtcgacggtcggtttgattcagggcaccaaggtcgtgatcactggtccaact
cgattgccgcgtacggagttgggtcggcgcctgtcggacgccgggctcgacgtgatgaac
agtatcagtggcaggaccggcctggtcgtggccaaccaggatgcgccggactcgcgaaag
ctccagcgtgcggctgagctgggtatcactgtggtcgacgagagcacggtgttgcgtctt
tgctcggatatcgttgctggagtgctcaaatcggcaccggagtcgatcgaggtcgtgacg
atcatcgatgctccgtcggtcgagccggcgccagcgactcctgtccggggcccatgggcc
ggccgccgggtgctggtgatgggcggtagtcatgtcgaggcgaccgtgatgcgttcgcgg
atcgttcaattgggtgcggcaccggcaatcaatctgaccgcgggggtgaccgacgtactg
ctcctcgacggtggggctggggatccacggatgcccagagttcgtgaccgatcgttgacg
atcctcgagatgcaccacatagacgctgcgctagggatcggcagcgatccggctgagaag
cacgacgacgccgactcatcacaacaggagtggacgcccgcaatgatgcctcctggcgcg
gtgatcgacctccccgccggtctcatgacgttcaccgtgaacgtggcatggacggctgcg
cgagccaagtcgcctgaggtcgacgtcgtcgcctttgaactcggtgacgacgagaaagtg
ttgtccgatgatgagttcgtgttcttcaatcaaccggcgagtcccgatggcgcattgact
ctgtccatcgacggtgactgtgaacaaggtgtccatgtcgacctgcagtccgtgcccgcc
gaggtcgcgcgcatcaccatcggcgccgcgatcgaagagatgacattcggagagctgggt
gctctgtcggtcagtgtcgataccccgaacgccaccgttgtctccgccgtgctggacgct
gcgactactgaacggtcgatgatcatcgcagagatctaccgacgaaagacccagtggcgg
ttgaggatgctcggacaaggctatgacgatgacctcggtggcttcgcggttcgtcacgga
gtggacgtggaagagtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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