KEGG T01719: GPOL

Gordonia polyisoprenivorans: GPOL_c23990

Entry

GPOL_c23990       CDS       T01719

Symbol

pafA

Name

(GenBank) Pup--protein ligase PafA

K13571

proteasome accessory factor A [EC:6.3.1.19]

Organism

gpo Gordonia polyisoprenivorans

Brite

KEGG Orthology (KO) [BR:gpo00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:gpo03051]
    GPOL_c23990 (pafA)
Enzymes [BR:gpo01000]
6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.1  Acid-D-ammonia (or amine) ligases (amide synthases)
    6.3.1.19  prokaryotic ubiquitin-like protein ligase
     GPOL_c23990 (pafA)
Proteasome [BR:gpo03051]
Prokaryotic proteasome
  Bacterial regulatory particles
   GPOL_c23990 (pafA)

SSDB

Motif

Pfam:

Pup_ligase

Other DBs

NCBI-ProteinID:

AFA73428

UniProt:

H6N2K3

Position

2738320..2739678

AA seq 452 aa
MQRRIMGIETEFGVTCTFHGHRRLSPDEVARYLFRRVVSWGRSSNVFLQNGARLYLDVGS
HPEYATAECDGLVQLINHDRAGELVLEDLLIDAEQRLADEGIGGDIYLFKNNTDSAGNSY
GCHENYLVVRAGEFSRISDVLLPFLVTRQLICGAGKVLATPKAATFCLSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAEKYRRLHVIVGDSNMAEMTTLLKVGSAALVLEMIEAGVVF
RDFALDNPIRAIREVSHDPTGRRPVRLAGGRQASALDIQREYHARAVEHLVNRRPDPEMD
MVVDLWGRMLDAVESGDFSGVDTEIDWVIKRKLFERYQDRYSMDLSDPKIAQLDLAFHDI
KRGRGVFDVLSRKGLVRRITTDEAIKTAVNEPPQTTRAKLRGDFISAAQKAGRDFTVDWV
HLKLNDQAQRTVLCKDPFRSVDERVDRLIASM

NT seq 1359 nt +upstreamnt +downstreamnt
gtgcagcgtcgaatcatgggcatcgagacggaattcggtgtcacgtgcaccttccacggt
catcgtcggctcagtccggacgaggtggcccgctatctgttccggcgggttgtctcgtgg
ggccggtcgtcgaatgtgttcctgcagaacggcgcgcggctctacctcgacgtcgggtcg
catccggagtacgcgaccgccgaatgcgacggtctggtccagctgatcaaccacgaccgg
gcgggtgaactcgtcctcgaggatctgctgatcgacgccgagcagcgcctggccgacgag
ggcatcggtggtgacatctacctgttcaagaacaacaccgattcggccggcaactcctac
ggatgccacgagaactatctggtggtgcgggcgggcgagttctcccgcatctccgatgtg
ctgttgccgttcctggtgacccggcagctgatctgcggcgcggggaaggtgctggccacc
ccgaaggcggcgaccttctgtctgtcgcagcgcgccgagcacatctgggagggtgtgtcg
tcggcgaccacgcgctcccgcccgatcatcaacacccgcgacgagccgcacgccgacgcc
gagaagtaccggcggctgcacgtcatcgtcggcgattccaacatggcggagatgacgacg
ctgctcaaggtcggctcggcggcattggtgctggagatgatcgaggccggcgtggtgttc
cgggatttcgccctggacaacccgattcgtgccatccgcgaggtcagccatgaccccacg
gggcgtcgcccggtccggctcgccggtggtcggcaggccagcgccctggacatccagcgc
gagtatcacgcgcgcgccgtcgaacacctggtgaaccggcgcccggatccggagatggac
atggtcgtcgatctgtggggccggatgctcgacgcggtggagagcggcgacttctccggg
gtggacaccgagatcgactgggtgatcaagcgcaagctgttcgagcgctaccaggaccgg
tactcgatggatctgtccgacccgaagatcgcgcaactcgacctggccttccacgacatc
aaacgcggtcgcggtgtcttcgacgtcctgtcccgcaagggtctggtccgccggatcacc
accgacgaggcgatcaagaccgcggtgaacgaaccgccgcagaccacccgggccaaactg
cgtggcgacttcatctccgcggcgcagaaggcgggtcgcgatttcaccgtcgactgggtc
cacctcaaactgaacgatcaggcgcaacgaacggtgctgtgcaaggacccgttccggtcg
gtcgacgagcgcgtcgatcgcctgatcgcgtccatgtga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (17)   

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