KEGG   Paraglaciecola psychrophila: C427_2125
Entry
C427_2125         CDS       T02535                                 
Name
(GenBank) lipid ABC transporter ATP-binding/permease MsbA
  KO
K11085  ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
Organism
gps  Paraglaciecola psychrophila
Pathway
gps02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:gps00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    C427_2125
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:gps02000]
    C427_2125
Enzymes [BR:gps01000]
 7. Translocases
  7.5  Catalysing the translocation of carbohydrates and their derivatives
   7.5.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.5.2.6  ABC-type lipid A-core oligosaccharide transporter
     C427_2125
Transporters [BR:gps02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB-BAC subgroup
    C427_2125
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N nSTAND3 AAA_16 RsgA_GTPase P-loop_TraG AAA_22 DEAD ABC_ATPase AAA Sigma54_activ_2 AAA_29 MTS_N DUF815 MMR_HSR1 nSTAND1 ATP-synt_ab AAA_23 APS_kinase Dynamin_N
Other DBs
NCBI-ProteinID: AGH44234
UniProt: K6Z5N0
Position
complement(2020296..2022053)
AA seq 585 aa
MFIENSSSDKQTLLRLVKYFAPHKVMLLIAIVGLVGFSIVDAGMIYFIQPLIDEGLAKSD
GNVLKLGALLVIVIFMLRGAASFISNYCMAYIGSKITFTVRRQAFSHLQYLPLDFFQKHN
AGKLISKITYDAEQISKATSEVFIVCIRESLIVLVLLGIMFHSSWQLSLIFLIVGPVIGL
AINYVSKRFKHISLNMQNAMGEVTRHTERSISSHREVLAFATQSLESSRFSEANNNNRRQ
YMKLATTSAISNPTIQLIASLAIAGVLWLASLDAVIGQTSAGAFTTTLVAMGSLLRPLKQ
LTNINQSLQRGLVAASSLFSVLDEPVETDSAKQQIRSFSKHIKVRNLNFSYSGNSQLVLK
NVSFTLNKGQTIALVGESGSGKSSIANLLMRFYITQEPHISIDDIPLNQLSLNNLRQQFS
LVSQQVVLFNDSIAANIAYGCHQSVTTGEIEEAARVSDVWGFAEKLPEGLDTYIGENGGL
LSGGQRQRIAIARAILRDAPILILDEATSALDTKSENRIQQTLSTLQQHKTTIVIAHRLS
TIQNADQILVMENGSVCEQGTHQELLLIKGAYYHLYQQQFHDLTS
NT seq 1758 nt   +upstreamnt  +downstreamnt
atgtttattgaaaactcatctagtgacaaacaaaccttgctcaggctagtgaaatatttt
gcaccgcataaggtcatgctattgattgctattgttggtcttgtcgggtttagcattgtt
gatgctggaatgatttattttattcaaccgctaatagacgagggattggctaagtctgat
gggaatgtacttaagttaggcgcgttattagtcatcgtcatttttatgcttcgaggtgct
gctagctttatatctaactactgtatggcttatatcggcagtaagataacgtttactgtc
aggcgccaggcgtttagccacttgcaatatttacctttggattttttccaaaagcataat
gccgggaaattgatatcaaaaataacctacgacgctgagcaaatttccaaagccacgtca
gaagtcttcattgtctgcattagagagagtctaatcgttttggttttactgggcataatg
ttccactcaagctggcaattatcattgatatttttgattgttggtcctgtcataggatta
gccatcaattatgtatctaaacgttttaaacacatcagtttaaatatgcaaaatgcaatg
ggggaagtaacacggcatacggaacgctccataagtagccatagagaagtcttagcattt
gccacgcagagccttgaaagttcacgatttagtgaagctaataataataatcgccggcaa
tatatgaagctcgcaacaacgtcagcaataagcaatccaactattcaactcattgcgtct
ttagcaatagccggtgtgctttggttagcaagtcttgacgctgtaataggccagaccagt
gcaggggcgtttaccacaacattagtcgccatgggctctttgcttagaccgttaaagcaa
ctgaccaatattaatcaatctttacaaagaggtttagtcgccgctagcagcctttttagt
gtgcttgatgagcctgttgaaactgattctgcaaagcaacagattaggtcttttagcaaa
catataaaagtgcgcaatctcaatttttcctattcgggtaatagccagctggtcctaaag
aatgtgagtttcactttaaataaaggtcaaacaatcgcattagttggagagtctggcagc
ggcaaatcgagcatagcaaacctactgatgagattttatattacgcaagagccacatatt
agcattgacgatattcccttaaatcaattgtcattaaataatctaagacaacagttttcg
ctggtctctcagcaagttgttttgtttaacgacagcatcgctgcgaatattgcatatgga
tgtcatcaatctgtcacaactggcgagattgaagaggcagcaagagtctcagatgtatgg
ggttttgctgaaaagttacctgaaggattagacacctacatcggagaaaatggcggccta
ttatctggaggacaaaggcaacggattgcgattgccagagcgatccttagggatgctcca
atacttattctggacgaggccacttcagcactcgacactaaatcagaaaacaggatccaa
caaacactgtctacattacagcaacacaaaaccacaatcgtgattgctcaccggctaagc
acgatacagaatgctgatcaaatactggtaatggaaaatggcagtgtttgtgaacaagga
actcatcaagaattattgttaataaagggcgcttattatcatctttatcagcaacagttt
catgacttaacgagttag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (21)   
   Pfam (21)   
All databases (47)   

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