KEGG   Paraglaciecola psychrophila: C427_4954
Entry
C427_4954         CDS       T02535                                 
Name
(GenBank) tRNA pseudouridine synthase D TruD
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
gps  Paraglaciecola psychrophila
Brite
KEGG Orthology (KO) [BR:gps00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:gps03016]
    C427_4954
Enzymes [BR:gps01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     C427_4954
Transfer RNA biogenesis [BR:gps03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    C427_4954
 Prokaryotic type
    C427_4954
SSDB
Motif
Pfam: TruD
Other DBs
NCBI-ProteinID: AGH47053
UniProt: K7AYP2
Position
4781471..4782520
AA seq 349 aa
MKIDHWLYQYPKLNISGQFKSSAEDFQVTEILGYEPIGEGEHIYLWVRKTGLNTAYLAEQ
IAKFTRLPLRAVTYAGRKDKHAQTEQWFSVHLPGKGEFDWTQFNEPGAQILKSIRHNKKL
RTGVLKGNRFNITLRQLNSTSGIDERLQQIKLSGVPNYYGSQRFGSTKHDPRGGNLVLAE
KMMSGESIRNRNKRSMAISALRSWLFNEMLNSRLQNDCLNKPLLGDVMQLSGSNSYFCAE
LIDNNIIQRIAQRDIYLSAPLWGKGLLASQSEALQFEQDSAQQHITVTQTLEDLGLNQER
RAINLFPNDLEWTWADDTLNLIFTLPAGTFATSVLRELLDVQDNNLAKV
NT seq 1050 nt   +upstreamnt  +downstreamnt
atgaaaatagatcactggctatatcaatatcctaagctaaatatttccgggcaatttaag
tcttctgctgaagactttcaggtcaccgaaatattaggctacgagcctattggcgaaggt
gaacatatctacttgtgggtacgtaaaaccgggttaaataccgcttacttagccgagcaa
attgctaaatttactcggctgccattaagagcagtaacttatgctggccgcaaagacaaa
catgcgcaaactgaacaatggtttagtgtgcatctgccgggcaaaggtgagtttgattgg
acccaattcaatgagccaggggcgcaaatactcaaatcaatacgccacaataaaaaacta
aggactggggtattaaaaggcaatcgatttaatattactctcagacaactcaactcgaca
tccggcattgatgagcgactgcaacagataaaactgagcggtgtcccaaattattatggc
tcacaacggtttggcagcactaagcatgaccctcgaggcggaaatttagtcttggctgaa
aaaatgatgagcggtgaatctatccgtaaccgaaacaaacgttcaatggctatttcagct
ctacgttcttggctcttcaatgaaatgctaaacagcagattgcagaatgattgtctaaat
aaacctttgcttggtgatgttatgcaattatcaggcagtaatagctacttttgtgcagag
cttatagataacaacattattcagcgcatagcacagcgggatatatatttgtctgctcct
ttgtggggaaaaggtctcttagccagccaatctgaggcattacagttcgagcaagattcg
gctcaacaacatattacagtcacccaaacccttgaagatttaggcttaaatcaagaaaga
agggcaataaacttatttccaaatgatcttgaatggacatgggcagatgataccttaaat
ctaattttcacacttccagcaggcacctttgctacctcagtattacgggaattgctagat
gtacaagataacaacttagctaaggtttaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (18)   

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