KEGG   Gibbsiella quercinecans: AWC35_05045
Entry
AWC35_05045       CDS       T05060                                 
Name
(GenBank) ATP-dependent RNA helicase RhlE
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:3.6.4.13]
Organism
gqu  Gibbsiella quercinecans
Pathway
gqu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gqu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AWC35_05045
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gqu03019]
    AWC35_05045
Messenger RNA biogenesis [BR:gqu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     AWC35_05045
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_22 Shikimate_DH UvrD-helicase
Other DBs
NCBI-ProteinID: ATA18761
UniProt: A0A250AY18
Position
complement(1135042..1136409)
AA seq 455 aa
MSFENLGLSAEILRAVEEQGYREPTPIQRQAIPVVLEGRDLMASAQTGTGKTAGFTLPLL
QLLSKHDHAAKGRRPVRALILTPTRELAAQIGENVVAYSKHLRLRSLVVFGGVSINPQMM
KLRGGVDILVATPGRLLDLEHQNAVDLSKIEILVLDEADRMLDMGFIHDIRRVLAKLPSK
RQNLLFSATFSDDIKGLASKLLHNPASVEVARRNTASEQVAQSVHFVDKKRKRELLSQMI
GAGDWRQVLVFNRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALSDFKDGRIRVLV
ATDIAARGLDIDQLPHVVNYELPNVPEDYVHRIGRTGRAERTGEAISLVCVDEHKLLRDI
ERLLKREIPRIAIPGYEPDPSIKAEPIINGRQGGGRGAPRGNGGGQRRSQGGGQRSANGS
GQRESREGGHARPQGEGQRRSGAPARRPRSRKPTE
NT seq 1368 nt   +upstreamnt  +downstreamnt
atgtcatttgaaaacctcggcttaagtgctgaaattctgcgcgctgttgaagaacagggc
tatcgtgaacctacgccaatccagcgtcaggccattcctgtggtattggaaggccgcgat
ctgatggccagcgcccagaccggcaccgggaaaaccgccggttttaccctgccgttactg
caattgctgagcaaacatgaccatgcggccaaaggccgccgcccggtgcgggcgctgatc
ctgacgccaacccgtgaattggcggcgcagatcggcgaaaacgtcgtggcttatagcaaa
cacctgcgcctgcgttcgctggtggtgttcggcggtgtgagcatcaacccgcagatgatg
aagctgcgcggcggcgtcgacattctggtggcaacgccggggcgcctgctggatctggaa
caccagaacgcagtagatctgtcgaaaattgaaattctggtgctggatgaagccgaccgc
atgctggatatggggttcatccacgatatccgccgcgtgctggccaagctgccgtcaaaa
cgccagaacctgctgttctccgccacgttctcggacgatatcaaagggctggcgagcaaa
ctgctgcataacccggcctctgttgaagtggcgcgccgcaataccgcctctgagcaagtg
gcgcagagcgtgcactttgtggataaaaagcgtaagcgcgagctgctttcccagatgatc
ggcgccggcgactggcggcaggtgctggtgtttaaccgcaccaaacacggtgctaaccac
ctggcggagcagttgaataaggacggcattaccgccgccgctattcatggcaacaagagc
cagggcgcgcgtacccgtgcgctgtccgattttaaagatggcaggatccgcgtgctggtt
gcgactgatatcgccgctcgcggtctggatatcgatcagttgccgcacgtcgtgaactac
gaactgcctaacgtgccggaagactacgtgcaccgtattggccgtaccggccgtgctgaa
cgcaccggcgaagctatttcactggtttgcgttgatgagcacaaactgctgcgcgatatc
gaacggctgctgaaacgcgaaattccgcgcattgctatcccgggctatgagccggatccg
tccatcaaggcggagccgatcatcaacggtcgccagggcggcgggcgtggtgcgccgcgc
ggcaatggcggtgggcagcgccgtagtcaaggtggcggtcagcgctctgccaacggcagc
ggccaacgcgaaagccgcgaaggcggccatgcgcgcccgcagggtgaaggccagcgccgc
agcggtgcgccagcacgccgcccgcgcagccgtaagcctacggaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (25)   

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