KEGG   Gossypium raimondii: 105767370
Entry
105767370         CDS       T04129                                 
Name
(RefSeq) DNA polymerase epsilon subunit B
  KO
K02325  DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
Organism
gra  Gossypium raimondii
Pathway
gra03030  DNA replication
gra03410  Base excision repair
gra03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:gra00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    105767370
   03410 Base excision repair
    105767370
   03420 Nucleotide excision repair
    105767370
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gra03032]
    105767370
   03400 DNA repair and recombination proteins [BR:gra03400]
    105767370
Enzymes [BR:gra01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     105767370
DNA replication proteins [BR:gra03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    105767370
DNA repair and recombination proteins [BR:gra03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      105767370
SSDB
Motif
Pfam: DNA_pol_E_B Dpoe2NT CcmE
Other DBs
NCBI-GeneID: 105767370
NCBI-ProteinID: XP_012442332
Position
5:377520..381136
AA seq 525 aa
MRGQTRKKIQKKLKIRGYSLKTDGLDEILSFVNRFQDAEDEAIDLLLDQLDHQSLKSSII
DKEAVHQVVSLLLDAEAAEEESPSSSHSSIRVVDAFLIPKFRYDPIKKHFFQHAGSLPIH
GEASAKAALYRDRLLLLFQRVSRDQHFIKPAFDTDVDTSPSCQLSTIQSLVGQRGRRWVM
GVISQLEDGHFYLEDLTAAVEIDFSKAKITTGFFTENTIIVAEGEMLSEGIFQVITCGFP
PLENRDKSLKVLAGHDFFGCGTLTKEETLRLADLEKRAVNDMFVILSDIWLDNEQVMEKL
ETVLNGFENVEIVPSLFVFMGDFCSHPCNLSFHSFSSLRSQFGKLGQMIEAHPRLKEQSK
FLFIPGPNDTGPSTVLPRCALPKYLTEELQKHVPNAIFSSNPCRVKFYTQEMVFFRQDLL
YRMRRSCLIPPSTEETDDPFEHLVATITHQSHLCPLPLFVQPIIWNYDHCLHLYPTPHTI
VLGDRSEQKAFKYTGITCFNPGSFSDDSTFVAYRPCTQEVEFSAL
NT seq 1578 nt   +upstreamnt  +downstreamnt
atgagggggcaaactcgtaagaagattcaaaagaaattgaagataagaggatacagcttg
aagacggatggtcttgatgagattctctccttcgtcaatcgcttccaagatgctgaagat
gaggctatcgatctcctcctcgaccagctcgatcaccaatccttgaaatcttccataatc
gacaaggaggcggtgcaccaagtagtcagtcttctattggatgctgaagcagctgaggag
gaatccccttcttcttctcattcctcgatccgcgttgttgatgcctttcttatccccaaa
tttagatacgatcccatcaagaagcatttctttcaacatgcgggtagtctacccattcat
ggggaagcttctgcgaaagcagctctttatagagatagattgttgttgttgttccaaagg
gtttctcgtgatcagcattttattaaacctgcatttgatactgatgttgatacctctcca
agctgtcagctatcaacaatacagtctctggttgggcaaagagggaggagatgggtgatg
ggtgtcatctcccagttggaggatggtcatttttacttggaagaccttactgctgctgtt
gaaatagacttctccaaagcaaagataactacaggatttttcaccgagaacactataatt
gtagcagaaggtgaaatgctttctgagggaatttttcaggtaattacatgtggctttcct
cccttagagaacagagataaatcactcaaagtacttgctggacatgacttctttggttgt
ggtacactaacaaaagaggagacactgagacttgcagatttggaaaagagagcagtaaat
gacatgtttgtcatactatctgacatttggctggacaatgaacaggttatggaaaagctg
gagactgtccttaatggatttgagaatgtggaaatcgttccttccttatttgttttcatg
ggagatttttgttctcacccatgtaatctctcctttcattctttctcaagtctcagatcg
caatttggaaaattaggccaaatgattgaagcccatccccgactgaaagaacagagcaag
tttctgtttattccaggtcccaatgatacaggtccatcaactgttttacctcggtgtgct
ttaccaaaatatctaactgaagagctccagaagcatgttccaaatgccatattttctagt
aatccctgcagggtaaagttctacacgcaggaaatggtcttctttcgtcaagatctactg
tatagaatgcgacgttcttgtttgattcccccttccactgaagaaacagatgatcctttt
gaacatcttgttgcaaccattacccatcaaagtcacctctgcccactgcctctctttgta
caacccatcatttggaattatgaccattgtctccatctatatccgactccacatacgatc
gttttaggtgatagaagtgagcagaaggcattcaagtatactggaattacttgcttcaat
ccaggttccttctcagatgatagcacatttgttgcatatagaccttgcactcaggaagtt
gagttttcagccttgtga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (18)   

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