KEGG   Gossypium raimondii: 105776475
Entry
105776475         CDS       T04129                                 
Name
(RefSeq) ISWI chromatin-remodeling complex ATPase CHR11 isoform X1
  KO
K11654  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
gra  Gossypium raimondii
Pathway
gra03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:gra00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    105776475
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gra03021]
    105776475
   03036 Chromosome and associated proteins [BR:gra03036]
    105776475
Transcription machinery [BR:gra03021]
 Eukaryotic type
  RNA polymerase I system
   Other transcription-related factors
    NoRC (nucleolar remodeling complex)
     105776475
Chromosome and associated proteins [BR:gra03036]
 Eukaryotic type
  Chromatin remodeling factors
   CHRAC complex
    105776475
   RSF complex
    105776475
   WICH complex
    105776475
   B-WICH complex
    105776475
   NORC complex
    105776475
   BRF complex
    105776475
   NuRF complex (fruit fly)
    105776475
SSDB
Motif
Pfam: SNF2-rel_dom SLIDE Helicase_C ResIII Myb_DNA-binding HAND DBINO DEAD HDA2-3 AAA_14
Other DBs
NCBI-GeneID: 105776475
NCBI-ProteinID: XP_012454591
UniProt: A0A0D2TA54
Position
10:44013785..44020281
AA seq 1060 aa
MAKSSKPASSDEPLSNGSDSSEDERINDRMEEDDDDDEELEAVARSDAASDEDDEPVPEE
IADEDESNGDDPEVSKREKERLKEMQKLKKQKVQEILDAQNAAIDADMNNRGKGRLKYLL
QQTELFAHFAKGDQSSSQKKVKGRGRHASKVTEEEEDEECLKEEEDGLSGNTRLVTQPSC
IQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLMGYLHEYRGITGPHMVV
APKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRYIREELLVAGKFDVCVTSFEMAIKEKS
TLRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLL
PEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVG
MSQMQKQYYRALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDH
LITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMFRGYLYCRIDGNTGGED
RDASIESFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIG
QKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMVRFGAE
MVFSSKDSTITDEDIDRIIAKGEAATAELDAKMKKFTEDAIKFKMDDTAELYDFDDDKDE
NKFDLKKIVSENWIEPPKRERKRNYSESEYFKQTMRQSAPAKPKEPRIPRMPQLHDFQFF
NTQRLSELYEKEVRYLMQTHQKNQVKDTIDVDEPEVGGDPLTAEELEEKERLLEEGFSSW
SRRDFNTFIRACEKYGRNDIKSIASEMEGKTDQEVERYAKVFKERFKELNDYDRIIKNIE
RGEARISRKDEIMKAIGKKLDRYKNPWLEMKIQYGQNKGKLYNEECDRFMVCMVHKLGYG
NWEELKAAFRTSPLFRFDWFVKSRTTQELARRCDTLIRLVEKENQECDERERQARKEKKL
AKNITPSKRGGRQPTESPTQQKKRKQLSMDDYANSGKKRK
NT seq 3183 nt   +upstreamnt  +downstreamnt
atggcgaaatcgtcgaagccggcgtcgtctgatgaacccctatccaacggctccgattct
tctgaagatgagcgaatcaacgaccggatggaggaagacgacgacgacgacgaagagctc
gaagccgttgcacgctccgacgccgcttccgacgaagacgatgaacccgtccctgaagaa
atcgccgatgaggacgagtctaacggtgatgatccagaagttagtaagcgtgaaaaggaa
aggttaaaagaaatgcagaagctaaagaagcagaaggttcaggaaatattggacgctcag
aatgctgccattgatgctgatatgaataatagggggaaggggcgtttgaagtatcttttg
cagcaaacagagttgtttgctcattttgctaaaggtgaccaatcttcatcacaaaaaaag
gtgaaaggaaggggccgtcatgcttcaaaagtaactgaagaggaagaagatgaagagtgt
ttgaaggaggaagaagatggtttgtctggaaatacacgattggtgactcagccttcttgt
attcagggaaagatgagggactaccaacttgctggtttaaattggcttatacgactgtat
gagaatggtatcaacggaattctagcagatgaaatgggattgggaaaaactttgcaaacc
atctccttaatgggctatctgcatgaataccgcgggattactggccctcatatggttgtt
gctccaaaatcaactcttggtaactggatgaatgaaattcgtcggttttgcccagtcttg
cgagctgtaaagtttcttgggaatcctgaggaacggagatacatccgtgaggagttactg
gttgctgggaagtttgatgtctgtgtcacaagttttgaaatggccatcaaggagaagtct
accttgcgtcgttttagttggcgctatataattattgatgaagcccatcgaatcaagaat
gagaattcactcctttcaaaaacaatgagactctacaatactaattaccgtcttcttatt
acgggtactccacttcagaataatctccatgagctttggtctcttcttaactttttattg
ccagagatttttagttcagctgaaacctttgatgagtggttccagatttctggtgaaaat
gatcagcaggaagtcgttcaacaacttcacaaggttcttcgtccatttctccttcgtaga
ttgaagtcagatgttgaaaaaggtttgcctcccaagaaggaaactatcctgaaagttgga
atgtcccagatgcagaaacagtactatagggctttgttgcaaaaagatcttgaagttgtt
aatgctggtggagagcgtaagcgtcttctgaacatcgcaatgcagctgcgcaaatgctgt
aatcacccatatcttttccaaggtgctgaacctggacctccatatactacaggggaccat
cttataaccaatgccggcaaaatggttctcttggacaagttacttccaaagctgaaggaa
cgtgattctcgagttctgatattttcacagatgacaaggctgctggatattcttgaagat
tatttgatgtttcgcgggtacctgtattgccggattgatggtaacacaggtggagaagat
cgtgatgcgtccattgaatcctttaataagcctggaagtgagaaatttgttttcttgtta
tcaactagagctggaggccttggtattaaccttgctacagcagatgttgtcattctttac
gatagtgactggaacccacaagttgatttgcaagcacaagatcgtgctcataggattggt
caaaagaaagaagttcaagtgttccgcttttgcacggagtatactattgaggaaaaggtg
attgagagggcttataaaaagctcgccctagatgctctggttatccaacaaggacgatta
gcagagcagaagactgttaacaaggatgagttgcttcaaatggtgaggtttggtgctgaa
atggtcttcagttccaaggatagcacaatcactgatgaagacattgacagaatcattgcc
aaaggagaagcagcaactgctgaacttgatgccaagatgaagaaatttactgaggatgca
attaaatttaagatggatgatactgctgaattgtatgattttgatgatgataaggatgag
aacaagtttgacttaaagaaaattgtaagtgaaaactggattgaacctcctaaaagagag
cggaagcggaattactcagaatctgagtacttcaaacaaaccatgcgccagtcagctcca
gcaaaaccaaaggagcctcgtattcctcgcatgcctcaactgcatgatttccaatttttt
aacactcagaggctaagtgagttgtatgagaaagaagtacgctatctcatgcaaacacat
cagaagaatcaggtaaaggacacaattgatgtggatgaacctgaagtagggggagatcca
ttaaccgctgaagagttggaagaaaaggagagactactagaagagggattttcttcatgg
agtagaagagatttcaatactttcattagagcttgtgagaagtatggacggaatgatata
aaaagtattgcttcagaaatggaagggaaaacggatcaggaagttgaaagatatgctaaa
gtttttaaggaacgcttcaaggagttaaatgattatgataggataattaagaacattgaa
cgaggagaggccagaatttctagaaaagatgagatcatgaaagcaattggcaaaaaattg
gatcggtacaagaatccctggctggaaatgaagatccaatatggtcagaacaaagggaag
ctgtacaatgaagaatgtgatcgattcatggtatgcatggttcacaagcttggttacggg
aattgggaggagttgaaggcagcatttcgtacatcacccttgtttcgatttgattggttt
gtgaagtcgcggacgactcaagagctggctcggagatgtgataccctcatccgattggtt
gagaaggaaaaccaagaatgtgatgagagggagcgacaagcccgcaaggaaaagaaactt
gccaagaacataacaccatcaaagcgtggagggaggcagccaactgagagtcctactcaa
caaaagaaacgcaagcagctatcaatggatgattatgcgaactcgggtaaaaagaggaag
tga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (10)   
   Pfam (10)   
All databases (24)   

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