KEGG   Gossypium raimondii: 105776528
Entry
105776528         CDS       T04129                                 
Name
(RefSeq) lysine-specific demethylase JMJ28 isoform X4
  KO
K15601  [histone H3]-dimethyl-L-lysine9 demethylase [EC:1.14.11.65]
Organism
gra  Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:gra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gra03036]
    105776528
Enzymes [BR:gra01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.65  [histone H3]-dimethyl-L-lysine9 demethylase
     105776528
Chromosome and associated proteins [BR:gra03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    105776528
SSDB
Motif
Pfam: WRC JmjC zf-4CXXC_R1 Cwf_Cwc_15 Serglycin
Other DBs
NCBI-GeneID: 105776528
NCBI-ProteinID: XP_012454677
Position
10:complement(1695079..1700758)
AA seq 1039 aa
MEGEGAIPDHLRCNRTDGRQWRCKRRVMEGKKLCELHHIQGRHRQNKQKVPESLKMQRKK
RKKKVFEKNKLEIRAKLLKLARPVKRKRVIGGESEALDEAVRKMKLKRGDLPLELIRMVL
KREAEKKKKKRKESECSDFDDDDDDDDDDEKGDLMRELPNGLMAISSSSPHFDNAGSCSG
SGSASGSGSVSGSCINVKVGETDNNAVAITRRRFRSKNIEPLPVGTLQVLPYKKNGANLR
RGRRIRCHWCRKGGAPNLIKCSSCKQQFFCLDCIKEHYFFKREEVQVACPVCRGTCGCRA
CSVSQRRDDECKEFLRDKIKVDKVLDFHYLICMLLPVFKQINQDQSVEIDVEAKIQGKKL
CDIQVQPAESGGNKEYCCSYCKTLILDFHRSCPKCSYSLCLSCCRDIFQGNLFGTIKEVN
CKCPKRRKTCLPGICLSDRKSVRITRQTSDSRYSDSFVSLPSQKAPDGSVPISCPPSEFG
GCGDGLLDLRCILPQSWFKELEVSAEEIVGSYELPEAFDTFSCCSLCPATDDEAKRVKQL
QEASRRENSNDNFLFYPTVLNIHGDNLEHFQKHWCKGHPVIFRNVLRTTALSWDPIFLFC
SYLKNSVAKAENEEPSKATTCSDWFEVEIGIKQLFLGSLRGLAQSSMCDEKLKLKGWLSS
PLFQEQFPDHYSEIIQSLPLREYMNPGSGILNIAARLPQEITKPDLGPSVSISYCSSEEL
AQANSVTNLCYGLCDMVNVLAHATDAPVCMKQLNKIRKLMKKKKFQDERELAKTHLDQKM
ANEVKEKSKSNGENIKVGLNGMIYKEMHSRNTVPKLSRSPSAVHDAHDKEDSSDSDSDSD
SDCNSNSEAALHPCDTIHGSEALEDQEIFGKRTDLAKSCGAEWDVFRRQDVPKLMEYLRK
HSNEFGHTCGFQKHVVHPILDQNFFLDTSHKRRLKEEYEIEPWTFEQHVGEAIIIPAGCP
YQIRNVKSCVNVVLDFVSPENVTECIRLINEFRLLPDDHKAKAKKFEVEKMALYRISAAI
KEIRELICSEFRSSAELSE
NT seq 3120 nt   +upstreamnt  +downstreamnt
atggagggggaaggtgctataccggaccatctccggtgcaatcgaacagacgggagacaa
tggcggtgtaagcgacgtgtaatggaaggaaaaaagctctgtgagcttcaccatatccaa
ggccgtcatcgacagaataaacagaaagtgccggaatccttgaaaatgcaaaggaaaaag
aggaaaaagaaggtttttgagaagaataagcttgaaattagggcaaagttgctgaaatta
gcgaggccggtgaagaggaagcgagtgatcggaggggaatcggaggcgttagatgaagct
gttcgtaagatgaaactgaagagaggggatttgccattggagcttataaggatggttttg
aaaagagaagctgagaagaagaaaaagaaaaggaaagaaagtgagtgtagtgattttgat
gatgatgatgatgatgatgatgatgatgaaaagggtgacttgatgagagaattgcctaat
gggttaatggctatttcttcgtcaagtccacattttgataatgcaggttcatgctctggt
tctggttcggcttccggttctggttctgtttcaggttcttgtattaatgttaaagtagga
gaaactgataataatgctgttgccattaccagaaggcggtttcggtctaagaacattgaa
ccattacctgttggtacattgcaggttctgccatacaagaagaatggagcaaatttgagg
agagggagaagaataaggtgccattggtgtcgaaaaggcggtgctcctaatttgatcaag
tgttctagttgtaaacagcagttcttttgcttggattgcataaaagaacactattttttt
aagcgagaagaagttcaggtagcttgtccggtatgccgtggaacttgtggctgcagggcc
tgctcagtgagtcaacgtagagacgatgaatgtaaggagtttctaagggacaagatcaaa
gtagacaaggtgttagattttcattatttgatctgcatgctccttcctgtttttaagcaa
ataaaccaagaccagagtgttgagattgatgtggaggccaaaattcaaggcaaaaaactc
tgtgatattcaggtccaacctgctgaatctggtggcaataaggaatactgttgcagttac
tgcaagactctcattctggatttccatagaagctgcccaaagtgttcatatagcctctgc
ttaagttgttgtcgggatatctttcaagggaatttattcggaactatcaaagaagttaac
tgcaaatgcccaaagagaaggaaaacttgtttgcccggtatttgcctttcagataggaaa
tctgtaagaataaccaggcagacctctgacagtaggtattctgattcttttgtatcattg
cctagtcagaaagctcctgatggcagtgttcctatctcatgcccacctagtgagtttggt
ggttgtggtgatggccttcttgatctgagatgtattttgccgcaaagttggttcaaagag
ctggaagtaagtgctgaagagatagttggcagctatgaattgccggaagcatttgatact
ttttcatgctgctccttatgtcctgcgacagatgatgaagccaaaagggtgaagcagttg
caagaggcttctaggagagagaattcaaatgataacttcctattttaccccactgtattg
aacattcatggtgataacctggagcacttccagaagcattggtgtaaaggccatcctgta
atatttcggaatgttcttcggactactgctttaagttgggatccaatattcttgttttgc
tcatatcttaagaatagtgttgccaaagctgagaacgaagagccaagtaaagctacaact
tgttcagactggtttgaggttgaaattggtattaagcagttatttttggggtcattaagg
gggctggcacaatctagtatgtgtgatgagaagctgaaactgaagggctggctttcttct
cctttatttcaagaacaattcccggatcattattctgaaatcattcaatctttaccactt
cgagaatatatgaatcctggaagcggcattttgaacattgctgcaaggttgccacaagaa
atcacaaagcctgacctaggtccatctgtctctatctcttattgcagcagtgaggaactt
gcacaagccaattccgtgacaaatttgtgttatggtttatgtgatatggttaatgttttg
gcacatgctacagatgctcctgtttgcatgaagcaacttaataaaataagaaagttaatg
aaaaagaaaaaatttcaagacgaaagggaacttgctaagactcaccttgatcaaaagatg
gctaatgaagtgaaagaaaaatctaagtcaaatggtgaaaacataaaagtaggattgaat
ggtatgatctataaagaaatgcattctcgtaacacagttccaaaactttctcgatcacct
tctgcggtgcatgatgcacatgataaggaagacagctctgactctgactctgattctgat
tccgactgtaattcaaattctgaagctgcactacatccatgtgataccattcacggctca
gaagcattagaagatcaggaaatctttgggaaaagaacagatttggctaagtcttgtggt
gcagaatgggatgtcttccgcagacaggatgttccaaagcttatggagtaccttagaaag
cattcaaatgagtttggtcatacatgtggctttcagaaacatgtggttcatccaatcctc
gatcagaatttctttcttgatacaagtcacaaaaggaggctgaaagaggagtatgaaatt
gagccctggacatttgaacaacatgttggagaagccataataattccagctggctgtcca
taccagattagaaacgttaagtcctgtgttaatgtggttttggactttgtttcaccggaa
aatgtgaccgagtgtatccggttgatcaatgaatttcgtctgcttccagacgatcataaa
gccaaagcaaaaaagtttgaggttgagaagatggccctgtataggattagtgcagcaata
aaagaaatccgcgagcttatatgttcagagtttaggtccagtgctgagctcagtgagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (5)   
   Pfam (5)   
All databases (26)   

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