KEGG   Gossypium raimondii: 105777489
Entry
105777489         CDS       T04129                                 
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1
  KO
K04354  serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
gra  Gossypium raimondii
Pathway
gra03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:gra00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    105777489
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:gra01009]
    105777489
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gra03019]
    105777489
   03036 Chromosome and associated proteins [BR:gra03036]
    105777489
Protein phosphatases and associated proteins [BR:gra01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     105777489
Messenger RNA biogenesis [BR:gra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     105777489
Chromosome and associated proteins [BR:gra03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     105777489
SSDB
Motif
Pfam: WD40 ComGF
Other DBs
NCBI-GeneID: 105777489
NCBI-ProteinID: XP_012456252
UniProt: A0A0D2UQ17
Position
10:6003911..6012091
AA seq 508 aa
MNGGDEVVTAPAGPPQPLDWKFSQVFGERTAGEEVQEVDIISAIEFDKTGDHLATGDRGG
RVVLFERTDTKDHDALRRDLERMDHPINRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINK
IRWCQTANGALFLLSTNDKTIKFWKVQEKKVKKISEMNLDPPKAVGNGCVASSSNSNSPT
PCLANGGSPDNDFSFPPGGLPSLRLPVVVTSQETNLVARCRRVYAHAHDYHINSISNNSD
GETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSK
GSIRLIDLRQSALCDSHAKLFEEPEAPGSRSFFTEIIASISDIKFAKDGRYMLSRDYMTL
KLWDINMDSGPVSTFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVATGSYSNLFRV
FGCAPGSTEATTLEASKNPVRRQVQTPSRPSRSLSSITRVVRRGAETSGIDANGNSFDFT
TKLLHLAWHPTENSIACAAANSLYMYYA
NT seq 1527 nt   +upstreamnt  +downstreamnt
atgaacggaggagatgaggtggtcacagctccggcaggtccgccacaaccgttggattgg
aaattctctcaggtatttggtgaacgaacggctggagaagaagttcaagaagttgatatt
atttcagcaattgaatttgataaaactggggatcacctggccactggtgaccgtgggggc
cgggttgttctctttgagaggacagataccaaggatcatgatgcactgagaagggatttg
gagagaatggaccacccaattaatcggcaccctgagttccgttacaagacagagttccaa
agccatgagcctgagtttgactatctcaagagcttggaaatagaggaaaaaatcaacaaa
atcagatggtgccaaacagccaatggtgccctatttctcctttctacaaatgataaaacc
atcaagttttggaaggtacaagaaaagaaggtcaaaaaaatttctgaaatgaatttggac
cctccaaaagctgtaggaaatggctgcgtggctagttcaagtaattctaatagtcccaca
ccttgtcttgcaaatggaggttcccctgacaatgatttttctttcccaccaggaggcctg
ccatcattgcgtttgcctgtggtagtaactagtcaggaaaccaacctagtagctagatgt
cgaagagtatatgcccatgctcatgattatcacatcaattccatttcaaataacagtgac
ggcgaaacttttatatcagctgatgatctgcgtataaatctttggaacttggaaatcagc
aatcaaagtttcaatattgttgatgtaaagcctgcaaacatggaggatctaactgaggtt
ataacatcggcagagttccaccctacccactgtaatatgttagcgtatagtagttcaaaa
ggctcaattcgtctcattgatttgcggcagtcagctttgtgtgattctcatgccaaatta
tttgaagaaccagaggcacctggttctagatcattttttacagagataattgcctcgatc
tcagatattaaatttgcaaaggacggaagatacatgcttagccgtgattacatgactctt
aagctgtgggacatcaatatggattctggtccagtttcaactttccaggttcatgaatat
ttgagacctaagctatgtgatttgtacgaaaatgattctatctttgacaaatttgagtgt
tgcctaagtggtgatggattgcgtgtggcaacaggttcctacagcaatctattccgtgta
tttggttgtgcccctggaagcacagaggcaactactttggaagccagcaaaaatccagtg
aggagacaggttcagacgccctcaaggccctccagatccctaagcagtataactcgtgtt
gttagacgaggggctgaaacctctggaatagatgcaaatggaaattctttcgatttcaca
acgaagttgctgcacctagcatggcacccaaccgaaaactcaatagcctgtgctgctgca
aatagcttgtacatgtactatgcataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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