KEGG   Gossypium raimondii: 105778441
Entry
105778441         CDS       T04129                                 
Name
(RefSeq) pectate lyase
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
gra  Gossypium raimondii
Pathway
gra00040  Pentose and glucuronate interconversions
gra01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:gra00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    105778441
Enzymes [BR:gra01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     105778441
SSDB
Motif
Pfam: Pectate_lyase_4 Pec_lyase_N Beta_helix
Other DBs
NCBI-GeneID: 105778441
NCBI-ProteinID: XP_012457610
UniProt: A0A0D2NIX5
Position
1:complement(5500613..5502868)
AA seq 454 aa
MEVPKVRFALFFSFAALIPGLWANIAEFDDFWKQREEEAWNITLATYEPNPENVTNHFNY
NVNKFLKETSANQTIDFEDGITNNTRRYLRGKHKKYTGPCMATNPIDRCWRCKKNWAKNR
KRLAKCVLGFGHRTHGGSKGKYYVVTDNSDHDVLNPKPGTLRHAVIQKRPLWIIFARTMH
IKLSQELIVQSHKTIDGRGADVHIAYGAGFTLQFVHNVIIHNIHIHRIVPSSGGLIRDSE
DHFGYRTVGDGDGISIFGSSNIWLDHISMSECHDGLIDAIQGSTAITISNCHFTHHDAVM
LLGASDSYSKDQFMQVTLAFNHFGKELLQRMPRCRWGFFHVVNNDYTHWKMYAIGGSMHP
TIISQGNRFIAPHDPNAKEVTYRLYASESEWKNWIWRSEGDVLLYGAIFRTSGPPSPPHL
KFNRKEMIKSKPGAYVRRLTRFAGTLNCKKRIKC
NT seq 1365 nt   +upstreamnt  +downstreamnt
atggaggtacctaaggtgaggtttgctcttttcttttcgtttgccgcactaattccagga
ttatgggcaaatattgctgaatttgatgacttttggaagcaacgtgaggaagaagcatgg
aatattaccttggcaacttatgagccaaacccagaaaacgtcaccaatcatttcaactat
aacgttaacaagtttcttaaagaaactagtgccaaccaaaccatagattttgaggatggt
attactaacaacacgagaagatacttgagaggaaaacacaagaagtacactggtccgtgc
atggcgaccaatccaattgataggtgttggcggtgtaagaagaattgggccaaaaatcgt
aaacgattggcaaaatgtgtgcttggttttggccatagaactcatggtggaagtaagggg
aagtactatgtggtgacagataattctgatcatgatgttctaaacccaaaaccaggaacc
ttacgtcacgctgtgatccaaaaaaggccattgtggatcatttttgctcgtaccatgcac
atcaaattgtcacaagagctaattgttcaaagtcataagacaattgatggccgtggagca
gatgttcatatagcatatggagctggatttacacttcaatttgtgcacaatgtcatcatt
cacaacattcatatccatcgcattgttccaagttccggtggcctaatcagggactctgaa
gatcactttggttatagaacagtaggtgatggagatggaatttccatatttggatcatca
aatatttggcttgatcacatttctatgtctgagtgccatgatgggcttattgatgcaatc
cagggttctactgccatcaccatctcaaattgccatttcacccatcacgacgctgtgatg
ttgttaggagcaagtgatagctattctaaagatcaattcatgcaagtcacactagcattc
aaccattttggcaaggaattattacaaagaatgcctagatgtcgatggggtttctttcat
gttgttaacaatgactacacacattggaaaatgtatgctattggtggtagcatgcatccc
accattatcagccaaggtaacaggttcattgctccgcatgaccccaatgccaaagaggta
acttataggctctatgcatcagagtcagaatggaaaaattggatatggagatcagaagga
gacgtactcctttatggagccatctttagaacttctgggccaccctcgccaccccatttg
aaattcaacagaaaggaaatgatcaaatccaagcctggagcatatgtcagaagactcact
cgtttcgcagggactcttaattgtaaaaaaagaatcaaatgttag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

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