KEGG   Gossypium raimondii: 105779861
Entry
105779861         CDS       T04129                                 
Name
(RefSeq) elongation factor 1-alpha
  KO
K03231  elongation factor 1-alpha
Organism
gra  Gossypium raimondii
Pathway
gra03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:gra00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    105779861
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gra03019]
    105779861
   03016 Transfer RNA biogenesis [BR:gra03016]
    105779861
   03012 Translation factors [BR:gra03012]
    105779861
   04131 Membrane trafficking [BR:gra04131]
    105779861
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gra04147]
    105779861
Messenger RNA biogenesis [BR:gra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     105779861
Transfer RNA biogenesis [BR:gra03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    105779861
Translation factors [BR:gra03012]
 Eukaryotic type
  Elongation factors
   105779861
Membrane trafficking [BR:gra04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Other CMA associated proteins
    105779861
Exosome [BR:gra04147]
 Exosomal proteins
  Proteins found in most exosomes
   105779861
SSDB
Motif
Pfam: GTP_EFTU GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 GTP_EFTU_D4 FlpD Semialdhyde_dhC AAA_22 SRPRB
Other DBs
NCBI-GeneID: 105779861
NCBI-ProteinID: XP_012459272
UniProt: A0A0D2TLJ5
Position
4:33780453..33783244
AA seq 449 aa
MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK
VGYNPEKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGILKPGMVVTFGPSGLTTEVKSVEMHHESLPEALPGDNVGFNV
KNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
AELVTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQT
VAVGVIKSVEKKDPSGAKVTKSAAKKGGK
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgggcaaggaaaagactcacattaacattgtcgtaattggccatgtcgactctggaaag
tcaaccaccactggccacttgatctacaagcttggaggtattgacaagcgtgtcattgaa
aggtttgagaaggaagctgctgagatgaacaagaggtcattcaagtatgcttgggtgctt
gacaagttgaaggctgagcgcgaacgtggtattaccattgatattgccttgtggaagttt
gagaccaccaaatattactgcactgtcatcgatgcccctggacatcgtgactttatcaag
aacatgattactggtacctcccaggccgattgtgctgtacttatcattgactctaccact
ggaggttttgaggcaggtatttccaaggatggacagacccgtgagcatgctctgcttgct
ttcactctcggtgtcaagcaaatgatttgctgctgcaacaagatggatgccacaaccccc
aaatattcaaaggctaggtatgatgaaattgtgaaggaagtgtcttcctacttgaagaag
gttggttacaaccctgagaagattccttttgtccccatctccggttttgagggtgacaac
atgattgaaaggtccaccaaccttgattggtacaagggtccaactcttctcgaggctctt
gaccagatcaatgagcccaagagaccctctgacaagccactccgtcttccacttcaggat
gtgtacaagattggaggtattggaactgtccctgtgggtcgtgttgaaactggtatcctc
aagcctggtatggttgtaacctttggtccctctggattgaccactgaagttaagtctgtt
gagatgcaccatgagtctcttcctgaggctcttccaggtgacaatgttggcttcaatgtc
aagaatgttgctgtgaaggatctgaagcgaggatatgttgcttcgaactcaaaggatgat
cccgccaaggaggcagctaatttcacttcccaagtcatcatcatgaaccacccagggcag
attggaaatggatatgcacctgtccttgactgccacacctcccacattgcggtcaagttt
gcagagttggtgaccaagattgacaggcgatctggtaaggagcttgagaaggaacccaag
ttcttgaagaatggtgatgcaggatttgttaagatgattcccaccaaacccatggttgtg
gaaacattctctgagtatcccccactgggtcgttttgctgtgagggacatgaggcagact
gttgctgtcggcgttatcaagagcgtggagaagaaagatccatctggagccaaggtgacg
aagtctgctgccaagaagggtgggaagtga

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (24)   

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