KEGG   Gossypium raimondii: 105796326
Entry
105796326         CDS       T04129                                 
Name
(RefSeq) sm-like protein LSM36B
  KO
K12625  U6 snRNA-associated Sm-like protein LSm6
Organism
gra  Gossypium raimondii
Pathway
gra03018  RNA degradation
gra03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105796326
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105796326
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gra03019]
    105796326
   03041 Spliceosome [BR:gra03041]
    105796326
Messenger RNA biogenesis [BR:gra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     105796326
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     105796326
Spliceosome [BR:gra03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    105796326
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 105796326
NCBI-ProteinID: XP_012481425
UniProt: A0A0D2R792
Position
3:complement(607121..609918)
AA seq 91 aa
MSTTGEKGSATTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN
GQLKNKYGDAFIRGNNVLYISTSKRTLADGA
NT seq 276 nt   +upstreamnt  +downstreamnt
atgagtacaacaggagagaaagggtcggcaactacgaaaacacctgcagatttcctcaaa
tcgattcgtggtcgaccagttgtcgtgaaactcaattccggtgttgattatagaggtatc
ctagcttgcctagatggatatatgaacatagctatggaacaaacagaagaatatgtcaat
ggacaattaaaaaacaaatacggcgacgcatttattcgcgggaataacgtactttatata
agcacatcaaagaggacattagctgatggtgcatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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